RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 RNF24Q9Y225 148 aa12.1□□□□□ -0.47
TOP3A-202ENST00000461127 CTXND1A0A1B0GTU2 59 aa12.09□□□□□ -0.47
TOP3A-202ENST00000461127 NUDT3O95989 172 aa12.09□□□□□ -0.47
TOP3A-202ENST00000461127 KRTAP10-2P60368 255 aa12.09□□□□□ -0.47
TOP3A-202ENST00000461127 BLOC1S1P78537 153 aa12.09□□□□□ -0.47
TOP3A-202ENST00000461127 SPATA31B1PQ5VZV4 182 aa12.09□□□□□ -0.47
TOP3A-202ENST00000461127 MIR17HGQ75NE6 70 aa12.09□□□□□ -0.47
TOP3A-202ENST00000461127 RAB24Q969Q5 203 aa12.09□□□□□ -0.47
TOP3A-202ENST00000461127 SHANK2-AS3Q9BTD1 123 aa12.09□□□□□ -0.47
TOP3A-202ENST00000461127 SLC25A39Q9BZJ4 359 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-202ENST00000461127 H3BRN7 92 aa12.08□□□□□ -0.48
TOP3A-202ENST00000461127 H2AFB1P0C5Y9 115 aa12.08□□□□□ -0.48
TOP3A-202ENST00000461127 TAS2R45P59539 299 aa12.08□□□□□ -0.48
TOP3A-202ENST00000461127 TTC32Q5I0X7 151 aa12.08□□□□□ -0.48
TOP3A-202ENST00000461127 SIGLEC15Q6ZMC9 328 aa12.08□□□□□ -0.48
TOP3A-202ENST00000461127 SAT2Q96F10 170 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-202ENST00000461127 MAP1LC3B2A6NCE7 125 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 TEX46H3BTG2 121 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 RGS13O14921 159 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 HMGB3O15347 200 aaKnown RBP12.07□□□□□ -0.48
TOP3A-202ENST00000461127 BTF3P20290 206 aaKnown RBP12.07□□□□□ -0.48
TOP3A-202ENST00000461127 KHDC3LQ587J8 217 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 GDF5OSQ5U4N7 250 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 LCN15Q6UWW0 184 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 OR4B1Q8NGF8 309 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 FRZBQ92765 325 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 CLUHP3Q96NS8 147 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 MAP1LC3BQ9GZQ8 125 aa12.07□□□□□ -0.48
TOP3A-202ENST00000461127 TRAV5A0A0B4J249 113 aa12.06□□□□□ -0.48
TOP3A-202ENST00000461127 ZNF98A6NK75 572 aa12.06□□□□□ -0.48
TOP3A-202ENST00000461127 EIF3GO75821 320 aaKnown RBP eCLIP12.06□□□□□ -0.48
TOP3A-202ENST00000461127 ID1P41134 155 aa12.06□□□□□ -0.48
TOP3A-202ENST00000461127 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
TOP3A-202ENST00000461127 FOXI2Q6ZQN5 318 aa12.06□□□□□ -0.48
TOP3A-202ENST00000461127 SSX7Q7RTT5 188 aa12.06□□□□□ -0.48
TOP3A-202ENST00000461127 IQCF2Q8IXL9 164 aa12.06□□□□□ -0.48
TOP3A-202ENST00000461127 SAV1Q9H4B6 383 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-202ENST00000461127 A0A1B0GV50 99 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 OR7C2O60412 319 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 PSG9Q00887 426 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 MORN5Q5VZ52 161 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 OR8I2Q8N0Y5 310 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 PCNPQ8WW12 178 aaKnown RBP12.05□□□□□ -0.48
TOP3A-202ENST00000461127 MBD3L1Q8WWY6 194 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 LINC00052Q96N35 136 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 TMEM208Q9BTX3 173 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 SLC35B3Q9H1N7 401 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 Q9H8V8 135 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 LINC00588Q9Y4M8 146 aa12.05□□□□□ -0.48
TOP3A-202ENST00000461127 SRRM2Q9UQ35 2752 aaKnown RBP12.05□□□□□ -0.48
TOP3A-202ENST00000461127 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 F5H768 121 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 CXorf1O96002 111 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 STAG3L2P0CL84 134 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 STAG3L3P0CL85 134 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 FGF8P55075 233 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-202ENST00000461127 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 Q5VSD8 79 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 BPIFA4PQ86YQ2 179 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 C1orf158Q8N1D5 194 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 GPR82Q96P67 336 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 SLC25A2Q9BXI2 301 aa12.04□□□□□ -0.48
TOP3A-202ENST00000461127 FLG2Q5D862 2391 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-202ENST00000461127 BUB3O43684 328 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 NMBP08949 121 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 ARL14EPLP0DKL9 152 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 RPL7P18124 248 aaKnown RBP12.03□□□□□ -0.48
TOP3A-202ENST00000461127 DEFB1P60022 68 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 CLLU1Q5K131 121 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 PQLC2Q6ZP29 291 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 FAM167A-AS1Q96KT0 104 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 PAXXQ9BUH6 204 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 OR51M1Q9H341 326 aa12.03□□□□□ -0.48
TOP3A-202ENST00000461127 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.49
TOP3A-202ENST00000461127 DEFB130BP0DP73 79 aa12.02□□□□□ -0.49
TOP3A-202ENST00000461127 DEFB130AP0DP74 79 aa12.02□□□□□ -0.49
TOP3A-202ENST00000461127 GALR1P47211 349 aa12.02□□□□□ -0.49
TOP3A-202ENST00000461127 UBE2L3P68036 154 aaKnown RBP12.02□□□□□ -0.49
TOP3A-202ENST00000461127 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.49
TOP3A-202ENST00000461127 C18orf15Q96N68 181 aa12.02□□□□□ -0.49
TOP3A-202ENST00000461127 TMEM14CQ9P0S9 112 aa12.02□□□□□ -0.49
TOP3A-202ENST00000461127 ATP5G1P05496 136 aa12.01□□□□□ -0.49
TOP3A-202ENST00000461127 GCHFRP30047 84 aa12.01□□□□□ -0.49
TOP3A-202ENST00000461127 ATP5G3P48201 142 aa12.01□□□□□ -0.49
TOP3A-202ENST00000461127 PSMB3P49720 205 aa12.01□□□□□ -0.49
TOP3A-202ENST00000461127 Q9H3A6 140 aa12.01□□□□□ -0.49
TOP3A-202ENST00000461127 TMEM167BQ9NRX6 74 aa12.01□□□□□ -0.49
TOP3A-202ENST00000461127 OR10J4P0C629 311 aa12□□□□□ -0.49
TOP3A-202ENST00000461127 PYYP10082 97 aa12□□□□□ -0.49
TOP3A-202ENST00000461127 PGPEP1Q9NXJ5 209 aa12□□□□□ -0.49
TOP3A-202ENST00000461127 MYCBP2O75592 4640 aa11.99□□□□□ -0.49
TOP3A-202ENST00000461127 A0A1W2PPQ1 181 aa11.99□□□□□ -0.49
TOP3A-202ENST00000461127 IFNA1P01562 189 aa11.99□□□□□ -0.49
TOP3A-202ENST00000461127 PPT1P50897 306 aa11.99□□□□□ -0.49
TOP3A-202ENST00000461127 ZNF503Q96F45 646 aa11.99□□□□□ -0.49
TOP3A-202ENST00000461127 IGF2BP2-AS1Q96M15 143 aa11.99□□□□□ -0.49
TOP3A-202ENST00000461127 TMPRSS5Q9H3S3 457 aa11.99□□□□□ -0.49
TOP3A-202ENST00000461127 EREGO14944 169 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms