RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 GCN1Q92616 2671 aaKnown RBP9.19□□□□□ -0.94
NPHP4-204ENST00000460696 PCSK5Q92824 1860 aa9.19□□□□□ -0.94
NPHP4-204ENST00000460696 K7EIM0 57 aa9.19□□□□□ -0.94
NPHP4-204ENST00000460696 HLA-DMBP28068 263 aa9.19□□□□□ -0.94
NPHP4-204ENST00000460696 SCGB1D4Q6XE38 83 aa9.19□□□□□ -0.94
NPHP4-204ENST00000460696 A6NDN8 102 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 FAM120AOSQ5T036 256 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 IGF2BP2-AS1Q96M15 143 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 SYS1-DBNDD2H3BUS1 97 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 I3L2K1 104 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 GP9P14770 177 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 C20orf144Q9BQM9 153 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 FLNCQ14315 2725 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 H3BRN7 92 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 IFI27P40305 119 aaPredicted RBP9.18□□□□□ -0.94
NPHP4-204ENST00000460696 ZNF502Q8TBZ5 544 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 MOB4Q9Y3A3 225 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 COL12A1Q99715 3063 aa9.18□□□□□ -0.94
NPHP4-204ENST00000460696 TEX22C9J3V5 150 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 RNASE4P34096 147 aaKnown RBP9.17□□□□□ -0.94
NPHP4-204ENST00000460696 LEPP41159 167 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 UBE2E1P51965 193 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 SMIM12Q96EX1 92 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 C1orf159Q96HA4 380 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 FOXC2Q99958 501 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 TRAV8-6A0A0B4J262 113 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 FBLL1A6NHQ2 334 aaKnown RBP9.17□□□□□ -0.94
NPHP4-204ENST00000460696 H3BVH4 76 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 HBDP02042 147 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 EBLN2Q6P2I7 272 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 LURAP1LQ8IV03 231 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 PDE6HQ13956 83 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 PET117Q6UWS5 81 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 FAM159AQ6UWV7 190 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 SIGLEC15Q6ZMC9 328 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 TMEM75Q8N9X5 138 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 TMEM14CQ9P0S9 112 aa9.17□□□□□ -0.94
NPHP4-204ENST00000460696 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 LTAP01374 205 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 CT83Q5H943 113 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 DEFB104AQ8WTQ1 72 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 IFI27L1Q96BM0 104 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 TSPOP30536 169 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 OR11H6Q8NGC7 330 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 VGLL1Q99990 258 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 GFRA4Q9GZZ7 299 aa9.16□□□□□ -0.94
NPHP4-204ENST00000460696 TET2Q6N021 2002 aaPredicted RBP9.15□□□□□ -0.94
NPHP4-204ENST00000460696 IGHV2-70DA0A0C4DH43 119 aa9.15□□□□□ -0.94
NPHP4-204ENST00000460696 IGLV2-8P01709 118 aa9.15□□□□□ -0.94
NPHP4-204ENST00000460696 C21orf62-AS1Q17RA5 79 aa9.15□□□□□ -0.94
NPHP4-204ENST00000460696 PRR25Q96S07 402 aa9.15□□□□□ -0.94
NPHP4-204ENST00000460696 INS-IGF2F8WCM5 200 aa9.15□□□□□ -0.95
NPHP4-204ENST00000460696 IGLC2P0DOY2 106 aa9.15□□□□□ -0.95
NPHP4-204ENST00000460696 IGLC3P0DOY3 106 aa9.15□□□□□ -0.95
NPHP4-204ENST00000460696 ASIPP42127 132 aa9.15□□□□□ -0.95
NPHP4-204ENST00000460696 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.95
NPHP4-204ENST00000460696 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.95
NPHP4-204ENST00000460696 MPV17L2Q567V2 206 aa9.15□□□□□ -0.95
NPHP4-204ENST00000460696 NPFFR1Q9GZQ6 430 aa9.15□□□□□ -0.95
NPHP4-204ENST00000460696 GAGE10A6NGK3 116 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 JKAMPQ9P055 326 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 FAM231BA6NCW3 169 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 TEX43Q6ZNM6 134 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 IGLL1P15814 213 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 KRTAP10-9P60411 292 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 GTF2H5Q6ZYL4 71 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 FAM110DQ8TAY7 271 aaPredicted RBP9.14□□□□□ -0.95
NPHP4-204ENST00000460696 A0A087X0K7 114 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 IGHV1-24A0A0C4DH33 117 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 CRYGCP07315 174 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 ZFP36P26651 326 aaKnown RBP9.14□□□□□ -0.95
NPHP4-204ENST00000460696 LCNL1Q6ZST4 164 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 DYNLRB2Q8TF09 96 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 GTSF1Q8WW33 167 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 ST20Q9HBF5 79 aa9.14□□□□□ -0.95
NPHP4-204ENST00000460696 NACAE9PAV3 2078 aa9.13□□□□□ -0.95
NPHP4-204ENST00000460696 LINC00322Q6ZN03 302 aaPredicted RBP9.13□□□□□ -0.95
NPHP4-204ENST00000460696 ZNF418Q8TF45 676 aaPredicted RBP9.13□□□□□ -0.95
NPHP4-204ENST00000460696 TRBV7-1A0A0A6YYK4 115 aa9.13□□□□□ -0.95
NPHP4-204ENST00000460696 IGHV7-81A0A0B4J1V7 117 aa9.13□□□□□ -0.95
NPHP4-204ENST00000460696 A0A1W2PRX2 142 aa9.13□□□□□ -0.95
NPHP4-204ENST00000460696 PPBPP02775 128 aa9.13□□□□□ -0.95
NPHP4-204ENST00000460696 HOXB4P17483 251 aaPredicted RBP9.13□□□□□ -0.95
NPHP4-204ENST00000460696 ATMQ13315 3056 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 DLEU1O43261 78 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 USP34Q70CQ2 3546 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
NPHP4-204ENST00000460696 ZNF56Q15929 161 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 ZNF124Q15973 351 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 WFDC11Q8NEX6 87 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 OR4X2Q8NGF9 303 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 NDUFA3O95167 84 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 PLP1P60201 277 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 FAM104BQ5XKR9 115 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 LINC00173Q6ZV60 143 aa9.12□□□□□ -0.95
NPHP4-204ENST00000460696 NXT2Q9NPJ8 142 aaKnown RBP9.12□□□□□ -0.95
NPHP4-204ENST00000460696 IGLV11-55A0A075B6I3 123 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms