RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ASPHD1Q5U4P2 390 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 DEFB104AQ8WTQ1 72 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 ZC2HC1AQ96GY0 325 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 FAM208BQ5VWN6 2430 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 DENND4AQ7Z401 1863 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 STPG4Q8N801 248 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 ARFGEF3Q5TH69 2177 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 TSPAN13O95857 204 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 LINC01356Q8N9X3 169 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 COA6Q5JTJ3 125 aaKnown RBP11.72□□□□□ -0.53
PTPRU-205ENST00000460170 ANKHD1Q8IWZ3 2542 aaKnown RBP11.72□□□□□ -0.53
PTPRU-205ENST00000460170 SPG11Q96JI7 2443 aa11.72□□□□□ -0.53
PTPRU-205ENST00000460170 UBE2V1Q13404 147 aa11.72□□□□□ -0.53
PTPRU-205ENST00000460170 RNASE1P07998 156 aaKnown RBP11.72□□□□□ -0.53
PTPRU-205ENST00000460170 IGHV3-64A0A075B6Q5 118 aa11.72□□□□□ -0.53
PTPRU-205ENST00000460170 CD5LO43866 347 aa11.72□□□□□ -0.53
PTPRU-205ENST00000460170 C8orf86Q6ZUL3 223 aa11.72□□□□□ -0.53
PTPRU-205ENST00000460170 MRPL51Q4U2R6 128 aaKnown RBP11.71□□□□□ -0.53
PTPRU-205ENST00000460170 PRSS33Q8NF86 280 aa11.71□□□□□ -0.53
PTPRU-205ENST00000460170 LTAP01374 205 aa11.71□□□□□ -0.53
PTPRU-205ENST00000460170 GATA3P23771 443 aa11.71□□□□□ -0.53
PTPRU-205ENST00000460170 RIPPLY3P57055 190 aa11.71□□□□□ -0.53
PTPRU-205ENST00000460170 C11orf1Q9H5F2 150 aa11.71□□□□□ -0.53
PTPRU-205ENST00000460170 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.54
PTPRU-205ENST00000460170 TRGV4A0A0C4DH28 118 aa11.71□□□□□ -0.54
PTPRU-205ENST00000460170 IGHV1-24A0A0C4DH33 117 aa11.71□□□□□ -0.54
PTPRU-205ENST00000460170 A0A087WWL8 130 aa11.71□□□□□ -0.54
PTPRU-205ENST00000460170 SYNJ2BPP57105 145 aa11.71□□□□□ -0.54
PTPRU-205ENST00000460170 MAJINQ3KP22 176 aa11.71□□□□□ -0.54
PTPRU-205ENST00000460170 SEM1Q6ZVN7 128 aa11.71□□□□□ -0.54
PTPRU-205ENST00000460170 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
PTPRU-205ENST00000460170 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
PTPRU-205ENST00000460170 C10orf126Q8N4M7 172 aa11.7□□□□□ -0.54
PTPRU-205ENST00000460170 KIR3DS1Q14943 382 aa11.7□□□□□ -0.54
PTPRU-205ENST00000460170 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
PTPRU-205ENST00000460170 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
PTPRU-205ENST00000460170 GRNP28799 593 aaKnown RBP11.69□□□□□ -0.54
PTPRU-205ENST00000460170 EML6Q6ZMW3 1958 aa11.69□□□□□ -0.54
PTPRU-205ENST00000460170 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
PTPRU-205ENST00000460170 ACACBO00763 2458 aa11.69□□□□□ -0.54
PTPRU-205ENST00000460170 C17orf77Q96MU5 243 aa11.69□□□□□ -0.54
PTPRU-205ENST00000460170 COX11Q9Y6N1 276 aa11.69□□□□□ -0.54
PTPRU-205ENST00000460170 IGLL1P15814 213 aa11.69□□□□□ -0.54
PTPRU-205ENST00000460170 TMEM238C9JI98 176 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
PTPRU-205ENST00000460170 Q8N8P6 123 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 PLEKHB2Q96CS7 222 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 NDUFA4O00483 81 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 TEX43Q6ZNM6 134 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 WIPF2Q8TF74 440 aaPredicted RBP11.68□□□□□ -0.54
PTPRU-205ENST00000460170 VGLL1Q99990 258 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 WISP2O76076 250 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 CHAC1Q9BUX1 264 aa11.68□□□□□ -0.54
PTPRU-205ENST00000460170 Q6ZPA2 131 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 OR11H6Q8NGC7 330 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 SIGLEC8Q9NYZ4 499 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 ERG28Q9UKR5 140 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 CDPF1Q6NVV7 123 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 PTPRQQ9UMZ3 2332 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 KLHL30-AS1Q8NEE0 82 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 SAP30O75446 220 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 IGHV4-39P01824 125 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 RPL36AP83881 106 aaKnown RBP11.67□□□□□ -0.54
PTPRU-205ENST00000460170 MSMPQ1L6U9 139 aa11.67□□□□□ -0.54
PTPRU-205ENST00000460170 RPL36ALQ969Q0 106 aaKnown RBP11.67□□□□□ -0.54
PTPRU-205ENST00000460170 NDUFS7O75251 213 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 HTN3P15516 51 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 PATE2Q6UY27 113 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 TRGV1A0A0A0MS02 117 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 TRAV8-2A0A0B4J237 113 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 MORN5Q5VZ52 161 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 A0A0U1RRA0 63 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 A8MWV9 139 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 FAM120AOSQ5T036 256 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 PRR14LQ5THK1 2151 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 DEFB131AP59861 70 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 C2orf66Q6UXQ4 117 aa11.66□□□□□ -0.54
PTPRU-205ENST00000460170 PAX2Q02962 417 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 CR1LQ2VPA4 569 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 ADAMTS9Q9P2N4 1935 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 NPYP01303 97 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 NSUN5P1Q3KNT7 163 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 RNF223E7ERA6 249 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 TCF15Q12870 199 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 LGALS9BQ3B8N2 356 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 LGALS9CQ6DKI2 356 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 CFAP161Q6P656 301 aa11.65□□□□□ -0.54
PTPRU-205ENST00000460170 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.65□□□□□ -0.55
PTPRU-205ENST00000460170 INSP01308 110 aa11.65□□□□□ -0.55
PTPRU-205ENST00000460170 IGKV1-17P01599 117 aa11.65□□□□□ -0.55
PTPRU-205ENST00000460170 RITA1Q96K30 269 aa11.65□□□□□ -0.55
PTPRU-205ENST00000460170 GP9P14770 177 aa11.64□□□□□ -0.55
PTPRU-205ENST00000460170 MORN3Q6PF18 240 aaPredicted RBP11.64□□□□□ -0.55
PTPRU-205ENST00000460170 I3L2K1 104 aa11.64□□□□□ -0.55
PTPRU-205ENST00000460170 ODF3L1Q8IXM7 274 aa11.64□□□□□ -0.55
PTPRU-205ENST00000460170 ESDP10768 282 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms