RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SIGLEC15Q6ZMC9 328 aa7.24□□□□□ -1.25
NUDCD3-203ENST00000460110 BORCS7Q96B45 105 aa7.24□□□□□ -1.25
NUDCD3-203ENST00000460110 FMC1Q96HJ9 113 aa7.24□□□□□ -1.25
NUDCD3-203ENST00000460110 MEGF9Q9H1U4 602 aa7.24□□□□□ -1.25
NUDCD3-203ENST00000460110 PAM16Q9Y3D7 125 aa7.24□□□□□ -1.25
NUDCD3-203ENST00000460110 A0A0G2JLM5 398 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 PRAC2D3DTV9 90 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 IGLV2-8P01709 118 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 CD99P14209 185 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 SYNJ2BPP57105 145 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 FOXL1Q12952 345 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 NUP35Q8NFH5 326 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 F8P00451 2351 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 WI2-2373I1.2A0A1W2PRP0 233 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 FAM181BA6NEQ2 426 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 APCSP02743 223 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 PSG9Q00887 426 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 HIST1H1AQ02539 215 aaPredicted RBP7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 FAM106AQ4KMX7 169 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 Q86TA4 180 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 GRAMD2BQ96HH9 432 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 RPP21Q9H633 154 aaKnown RBP7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 F6UB75 175 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 IGHG2P01859 326 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 TMEM78Q5T7P6 136 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 ZC2HC1AQ96GY0 325 aa7.23□□□□□ -1.25
NUDCD3-203ENST00000460110 DIRC3C9JPN6 131 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 IGF2BP2-AS1Q96M15 143 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 YPEL4Q96NS1 127 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 RHPN1-AS1Q9BWJ2 59 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 TMEM189A5PLL7 270 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 SPRY2O43597 315 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 BUB3O43684 328 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 IGLC2P0DOY2 106 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 EDN2P20800 178 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 SRSF2Q01130 221 aaKnown RBP7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 OR4B1Q8NGF8 309 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 SMR3AQ99954 134 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 NACAE9PAV3 2078 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 LOC102724200A0A096LPH7 203 aaPredicted RBP7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 LOXL1Q08397 574 aaPredicted RBP7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 PSG3Q16557 428 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 FAM19A2Q8N3H0 131 aa7.22□□□□□ -1.25
NUDCD3-203ENST00000460110 F2Z2F3 143 aa7.21□□□□□ -1.25
NUDCD3-203ENST00000460110 M0QZ24 198 aa7.21□□□□□ -1.25
NUDCD3-203ENST00000460110 AMTP48728 403 aa7.21□□□□□ -1.25
NUDCD3-203ENST00000460110 KRTDAPP60985 99 aa7.21□□□□□ -1.25
NUDCD3-203ENST00000460110 COL5A1-AS1Q5SY13 56 aa7.21□□□□□ -1.25
NUDCD3-203ENST00000460110 TXN2Q99757 166 aa7.21□□□□□ -1.25
NUDCD3-203ENST00000460110 TMEM14CQ9P0S9 112 aa7.21□□□□□ -1.25
NUDCD3-203ENST00000460110 VPREB3Q9UKI3 123 aa7.21□□□□□ -1.25
NUDCD3-203ENST00000460110 ZNF688P0C7X2 276 aa7.21□□□□□ -1.26
NUDCD3-203ENST00000460110 PEF1Q9UBV8 284 aaKnown RBP7.21□□□□□ -1.26
NUDCD3-203ENST00000460110 POLR3KQ9Y2Y1 108 aaPredicted RBP7.21□□□□□ -1.26
NUDCD3-203ENST00000460110 FAM223BA6NKX1 122 aa7.21□□□□□ -1.26
NUDCD3-203ENST00000460110 C8orf86Q6ZUL3 223 aa7.21□□□□□ -1.26
NUDCD3-203ENST00000460110 FAM223AQ8IWN6 122 aa7.21□□□□□ -1.26
NUDCD3-203ENST00000460110 RNASE8Q8TDE3 154 aaKnown RBP7.21□□□□□ -1.26
NUDCD3-203ENST00000460110 ZNF48Q96MX3 618 aaPredicted RBP7.21□□□□□ -1.26
NUDCD3-203ENST00000460110 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 S100A4P26447 101 aaKnown RBP7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 TSKUQ8WUA8 353 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 SMAD5-AS1Q9Y6J3 95 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 ZFHX3Q15911 3703 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 IZUMO1RA6ND01 250 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 J3QLI3 93 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 HSBP1O75506 76 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 SERF1AO75920 110 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 GAGE1Q13065 139 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 WDR73Q6P4I2 378 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 TRBV9A0A0B4J1U6 114 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 A0A1W2PS18 150 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 TWIST1Q15672 202 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 ACTL10Q5JWF8 245 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 SMIM15Q7Z3B0 74 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 OR4C5Q8NGB2 326 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 USMG5Q96IX5 58 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 VAMP8Q9BV40 100 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 UFC1Q9Y3C8 167 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 LY96Q9Y6Y9 160 aa7.2□□□□□ -1.26
NUDCD3-203ENST00000460110 NUPR1O60356 82 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 ZNF138P52744 262 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 SLAQ13239 276 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 AGRNO00468 2067 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 ARMS2P0C7Q2 107 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 MYCNOSP40205 109 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 C1orf194Q5T5A4 169 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 PYGO2Q9BRQ0 406 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 ZFAND3Q9H8U3 227 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 NBPF19A0A087WUL8 3843 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 SH2D1AO60880 128 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 LTAP01374 205 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 KLHDC1Q8N7A1 406 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 ZFP30Q9Y2G7 519 aa7.19□□□□□ -1.26
NUDCD3-203ENST00000460110 SETXQ7Z333 2677 aaKnown RBP7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 HLA-DQA1P01909 254 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 HBBP68871 147 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 C18orf65Q6ZTR6 163 aa7.18□□□□□ -1.26
NUDCD3-203ENST00000460110 OR10J6PQ8NGY7 276 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms