RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 LINC00526Q96FQ7 95 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 SCGB3A1Q96QR1 104 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 SPANXDQ9BXN6 97 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 FKBP11Q9NYL4 201 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 PSORS1C2Q9UIG4 136 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 NESP48681 1621 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 COL1A1P02452 1464 aaPredicted RBP2.38□□□□□ -2.03
CCDC50-203ENST00000460064 ADAMTS7Q9UKP4 1686 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 SLIT2O94813 1529 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 ERICH3Q5RHP9 1530 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 OBSL1O75147 1896 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 ANKRD26Q9UPS8 1709 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 NSD3Q9BZ95 1437 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 OOSP1A8MZH6 123 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 CCL4P13236 92 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 BLCAPP62952 87 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 CDK5R1Q15078 307 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 MIAQ16674 131 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 C9orf153Q5TBE3 101 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 LINC01545Q5VT33 79 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 Q6AWC8 147 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 C2orf91Q6ZV80 131 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 C10orf111Q8N326 155 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 Q8NDZ9 215 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 LCN9Q8WX39 176 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 IMMP2LQ96T52 175 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 KDM5DQ9BY66 1539 aa2.37□□□□□ -2.03
CCDC50-203ENST00000460064 ARHGEF28Q8N1W1 1705 aaKnown RBP2.37□□□□□ -2.03
CCDC50-203ENST00000460064 MYH6P13533 1939 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 FRMPD1Q5SYB0 1578 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 DNMBPQ6XZF7 1577 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 KIF13AQ9H1H9 1805 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 TRGV5A0A0B4J1U4 118 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 IGHV3-15A0A0B4J1V0 119 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 A0A0D9SG52 128 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 MUC21A0A0G2JKD1 596 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 OR51F1A6NGY5 319 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 MCRIP1C9JLW8 97 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 ZNF737O75373 536 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 NPYP01303 97 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 IGLC1P0CG04 106 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 CRYGAP11844 174 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 SLC25A4P12235 298 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 KLRD1Q13241 179 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 MIC13Q5XKP0 118 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 SVBPQ8N300 66 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 FAM216BQ8N7L0 139 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 CCL4L1Q8NHW4 92 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 OTOSQ8NHW6 89 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 FGF13Q92913 245 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 MRPS24Q96EL2 167 aaKnown RBP2.36□□□□□ -2.03
CCDC50-203ENST00000460064 MCEEQ96PE7 176 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 GINS4Q9BRT9 223 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 BCL2L10Q9HD36 194 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 SAR1AQ9NR31 198 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 RPL26L1Q9UNX3 145 aaKnown RBP2.36□□□□□ -2.03
CCDC50-203ENST00000460064 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 PIK3C2AO00443 1686 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 ALPK3Q96L96 1907 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 MAPKBP1O60336 1514 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 MAP3K1Q13233 1512 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 ADGRB1O14514 1584 aa2.36□□□□□ -2.03
CCDC50-203ENST00000460064 TRPM1Q7Z4N2 1603 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 CEP162Q5TB80 1403 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.35□□□□□ -2.03
CCDC50-203ENST00000460064 C3orf85A0A1B0GTC6 90 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 A0A1W2PRS3 328 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 TCRBV3S1A0A5B6 114 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 A6NN06 94 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 TMEM262E9PQX1 116 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 H3BPC8 53 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 TPT1P13693 172 aaKnown RBP2.35□□□□□ -2.03
CCDC50-203ENST00000460064 RPL28P46779 137 aaKnown RBP2.35□□□□□ -2.03
CCDC50-203ENST00000460064 SS18Q15532 418 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 Q6ZS92 163 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 FP248Q71RG6 208 aaPredicted RBP2.35□□□□□ -2.03
CCDC50-203ENST00000460064 OR4X2Q8NGF9 303 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 AQP3Q92482 292 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 DPY30Q9C005 99 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 TMEM106BQ9NUM4 274 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 LINC00312Q9Y6C7 94 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 NRKQ7Z2Y5 1582 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 NUP98P52948 1817 aa2.35□□□□□ -2.03
CCDC50-203ENST00000460064 KTN1Q86UP2 1357 aaKnown RBP2.35□□□□□ -2.03
CCDC50-203ENST00000460064 SCN9AQ15858 1988 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 CFTRP13569 1480 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 CITO14578 2027 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 A0A1W2PQD3 144 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 TMEM235A6NFC5 223 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 PCNX2A6NKB5 2137 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 APOC4-APOC2K7ER74 178 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 MRPS14O60783 128 aaKnown RBP2.34□□□□□ -2.03
CCDC50-203ENST00000460064 TCL1BO95988 128 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 TRACP01848 142 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 APOC2P02655 101 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 MT-ATP8P03928 68 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 DEFA4P12838 97 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 IL7P13232 177 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 XCL1P47992 114 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms