RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 HLA-DMBP28068 263 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 TAGLN2P37802 199 aaKnown RBP7.78□□□□□ -1.16
UBR4-208ENST00000459947 TAS2R60P59551 318 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 IGFL4Q6B9Z1 124 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 CCDC28AQ8IWP9 274 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 PGPA6NDG6 321 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 C11orf94C9JXX5 98 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 S100A1P23297 94 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 TXNDC17Q9BRA2 123 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 SLC35B3Q9H1N7 401 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 KLK5Q9Y337 293 aaPredicted RBP7.78□□□□□ -1.16
UBR4-208ENST00000459947 DIRC3C9JPN6 131 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 S100A9P06702 114 aaKnown RBP7.77□□□□□ -1.17
UBR4-208ENST00000459947 SPINK13Q1W4C9 94 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 PYGO2Q9BRQ0 406 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 X6R8D5 127 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 IFNA1P01562 189 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 TCTAP57738 103 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 Q8NAQ8 132 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 C16orf74Q96GX8 76 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 ZNF492Q9P255 531 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 A0A0J9YWU9 116 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 ZNF680Q8NEM1 530 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 HIST1H2BAQ96A08 127 aa7.77□□□□□ -1.17
UBR4-208ENST00000459947 IGHV4-28A0A0C4DH34 117 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 C7orf71A4D174 169 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 CXorf65A6NEN9 183 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 M0R3E3 92 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 SPART-AS1P0CW21 52 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 C11orf45Q8TAV5 145 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 FAM213BQ8TBF2 198 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 LINC01587Q99440 93 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 TRAV1-1A0A0B4J248 108 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 LYRM9A8MSI8 78 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 CYB561D1Q8N8Q1 229 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 AGPAT4-IT1Q9H0P7 198 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 MANBALQ9NQG1 85 aa7.76□□□□□ -1.17
UBR4-208ENST00000459947 PRAC2D3DTV9 90 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 SULT1A2P50226 295 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 SAPCD1Q5SSQ6 148 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 FAM19A4Q96LR4 140 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 ATG101Q9BSB4 218 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 LOC102723971A0A1B0GUV8 181 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 KLLNB2CW77 178 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 GPX1P07203 203 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 CT45A10P0DMU9 189 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 FXYD7P58549 80 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 BLOC1S1P78537 153 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 C1orf158Q8N1D5 194 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 C9orf62Q8N4C0 152 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
UBR4-208ENST00000459947 M0R2Z0 102 aa7.74□□□□□ -1.17
UBR4-208ENST00000459947 IFNA7P01567 189 aa7.74□□□□□ -1.17
UBR4-208ENST00000459947 DEFB1P60022 68 aa7.74□□□□□ -1.17
UBR4-208ENST00000459947 EPDR1Q9UM22 224 aa7.74□□□□□ -1.17
UBR4-208ENST00000459947 CRXO43186 299 aaPredicted RBP7.74□□□□□ -1.17
UBR4-208ENST00000459947 TCRAP04437 139 aa7.74□□□□□ -1.17
UBR4-208ENST00000459947 TMEM263Q8WUH6 116 aaKnown RBP7.74□□□□□ -1.17
UBR4-208ENST00000459947 FAM210BQ96KR6 192 aa7.74□□□□□ -1.17
UBR4-208ENST00000459947 IGKV2-40A0A087WW87 121 aaPredicted RBP7.74□□□□□ -1.17
UBR4-208ENST00000459947 TRBV6-1A0A0K0K1D8 114 aa7.74□□□□□ -1.17
UBR4-208ENST00000459947 IGKV2D-40P01614 121 aaPredicted RBP7.74□□□□□ -1.17
UBR4-208ENST00000459947 SNRPCP09234 159 aaKnown RBP7.74□□□□□ -1.17
UBR4-208ENST00000459947 IGHV3OR16-12A0A075B7B8 117 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 PMS2P11Q13670 270 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 ZNF726P1Q15940 193 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 GFI1BQ5VTD9 330 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 EIF4E3Q8N5X7 224 aaKnown RBP7.73□□□□□ -1.17
UBR4-208ENST00000459947 SFT2D1Q8WV19 159 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 HMGB3O15347 200 aaKnown RBP7.73□□□□□ -1.17
UBR4-208ENST00000459947 ANXA2RQ3ZCQ2 193 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 GOLT1AQ6ZVE7 132 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 TRGV11A0A075B6L2 103 aa7.73□□□□□ -1.17
UBR4-208ENST00000459947 SUMO1P63165 101 aaKnown RBP7.73□□□□□ -1.17
UBR4-208ENST00000459947 TRAV21A0A0B4J279 112 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 KCNS1Q96KK3 526 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 FAM74A7A6NL05 159 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 FLI1Q01543 452 aaPredicted RBP7.72□□□□□ -1.17
UBR4-208ENST00000459947 FMC1Q96HJ9 113 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 RPH3ALQ9UNE2 315 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 SNURFLB1AK76 121 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 PEX7O00628 323 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 RGS13O14921 159 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 RBMY1A1P0DJD3 496 aaKnown RBP7.72□□□□□ -1.17
UBR4-208ENST00000459947 RBMY1CP0DJD4 496 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 ERCC8Q13216 396 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 RBMY1FQ15415 496 aaKnown RBP7.72□□□□□ -1.17
UBR4-208ENST00000459947 IBA57Q5T440 356 aaKnown RBP7.72□□□□□ -1.17
UBR4-208ENST00000459947 Q6AWC8 147 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 AGRNO00468 2067 aa7.72□□□□□ -1.17
UBR4-208ENST00000459947 CEMP1Q6PRD7 247 aaPredicted RBP7.71□□□□□ -1.17
UBR4-208ENST00000459947 VGLL1Q99990 258 aa7.71□□□□□ -1.17
UBR4-208ENST00000459947 ZFP30Q9Y2G7 519 aa7.71□□□□□ -1.17
UBR4-208ENST00000459947 AKR1C3P42330 323 aa7.71□□□□□ -1.18
UBR4-208ENST00000459947 ZFAND2AQ8N6M9 145 aa7.71□□□□□ -1.18
UBR4-208ENST00000459947 PSG8Q9UQ74 426 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms