RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 EDN2P20800 178 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 CKS2P33552 79 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF138P52744 262 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 DLX1P56177 255 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 HIST1H4AP62805 103 aaKnown RBP4.37□□□□□ -1.71
HMGB4-202ENST00000458277 PAX8Q06710 450 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 PLGLAQ15195 96 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 C10orf128Q5T292 105 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF497Q6ZNH5 498 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 MIR17HGQ75NE6 70 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 RNF144BQ7Z419 303 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF441Q8N8Z8 693 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 DAND5Q8N907 189 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 NFAM1Q8NET5 270 aaPredicted RBP4.37□□□□□ -1.71
HMGB4-202ENST00000458277 MBD3L2Q8NHZ7 208 aaPredicted RBP4.37□□□□□ -1.71
HMGB4-202ENST00000458277 TSACCQ96A04 125 aaPredicted RBP4.37□□□□□ -1.71
HMGB4-202ENST00000458277 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 METTL26Q96S19 204 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 FOXB1Q99853 325 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 FOXC2Q99958 501 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 DPH3P1Q9H4G8 78 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 OTORQ9NRC9 128 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 BEX4Q9NWD9 120 aaPredicted RBP4.37□□□□□ -1.71
HMGB4-202ENST00000458277 CHD9Q3L8U1 2897 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 LTBP2Q14767 1821 aa4.37□□□□□ -1.71
HMGB4-202ENST00000458277 IGKV1-6A0A0C4DH72 117 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 FAM236DA0A1B0GTK5 79 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF785A8K8V0 405 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 CCL16O15467 120 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 BUB3O43684 328 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 COX7A2P2O60397 106 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 ELANEP08246 267 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 FAM236CP0DP71 79 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 LOXP28300 417 aaPredicted RBP4.36□□□□□ -1.71
HMGB4-202ENST00000458277 DUTP33316 252 aaKnown RBP4.36□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF137PP52743 207 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 KRTAP27-1Q3LI81 207 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 Q6ZPA2 131 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 SDIM1Q6ZPB5 146 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 SLC25A45Q8N413 288 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 Q8N8P6 123 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 SSMEM1Q8WWF3 244 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 VSIG2Q96IQ7 327 aa4.36□□□□□ -1.71
HMGB4-202ENST00000458277 PHPT1Q9NRX4 125 aaPredicted RBP4.36□□□□□ -1.71
HMGB4-202ENST00000458277 COL4A6Q14031 1691 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 KIAA1549LQ6ZVL6 1849 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 LAMA3Q16787 3333 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 IGKV1-12A0A0C4DH73 117 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 A0A0U1RQV1 116 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 hADV29S1A0JD25 119 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 ZNF815PA8K554 130 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 D6R8Y8 96 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 IGKV1D-12P01611 117 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 IGHG2P01859 326 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 CDAP32320 146 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 CD70P32970 193 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 SYNJ2BPP57105 145 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 S100A7L2Q5SY68 101 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 C10orf113Q5VZT2 155 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 MDP1Q86V88 176 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 FAM19A4Q96LR4 140 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 S1PR3Q99500 378 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 BPTFQ12830 3046 aa4.35□□□□□ -1.71
HMGB4-202ENST00000458277 MED12LQ86YW9 2145 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 PDE4DIPQ5VU43 2346 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 TRAV40A0A0B4J280 105 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 A0A0G2JNJ9 132 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 LOC389332A0A1B0GUA5 103 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 C15orf61A6NNL5 157 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 LINC00473A8K010 186 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 TMEM178BH3BS89 294 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 MRPS12O15235 138 aaKnown RBP4.34□□□□□ -1.71
HMGB4-202ENST00000458277 IGLV2-14P01704 120 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 MYCNOSP40205 109 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 EFNA4P52798 201 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 DEFB103AP81534 67 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 FAM27BQ5VT28 67 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 LYPD1Q8N2G4 141 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 EXOC3-AS1Q8N2X6 119 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 MAPKAPK5-AS1Q8N8E1 139 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 WFDC5Q8TCV5 224 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 SRXN1Q9BYN0 137 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 Q9UFV3 132 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 EML5Q05BV3 1969 aa4.34□□□□□ -1.71
HMGB4-202ENST00000458277 TRANK1O15050 2925 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 TET1Q8NFU7 2136 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 NCOA6Q14686 2063 aaPredicted RBP4.33□□□□□ -1.72
HMGB4-202ENST00000458277 ATG2BQ96BY7 2078 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 IGKV1-27A0A075B6S5 117 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 TEX49A0A1B0GTD5 131 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.33□□□□□ -1.72
HMGB4-202ENST00000458277 C17orf100A8MU93 164 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 H0YGG7 62 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 IGHV3-33P01772 117 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 TCRAP04437 139 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 DEFA4P12838 97 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 NBL1P41271 181 aa4.33□□□□□ -1.72
HMGB4-202ENST00000458277 ZNF816Q0VGE8 651 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms