RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ODF3Q96PU9 254 aa9.18□□□□□ -0.94
TREX1-203ENST00000456089 WFDC1Q9HC57 220 aa9.18□□□□□ -0.94
TREX1-203ENST00000456089 FXYD6-FXYD2A0A087WZ82 144 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 A0A1B0GVY2 172 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 RTL8CO15255 209 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 RANP62826 216 aaKnown RBP9.17□□□□□ -0.94
TREX1-203ENST00000456089 ERCC8Q13216 396 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 OXA1LQ15070 435 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 GFI1BQ5VTD9 330 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 LYPD1Q8N2G4 141 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 HSD17B11Q8NBQ5 300 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 OR10G4Q8NGN3 311 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 OR10G9Q8NGN4 311 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 OR10G7Q8NGN6 311 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 OR2T35Q8NGX2 323 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 FXYD5Q96DB9 178 aa9.17□□□□□ -0.94
TREX1-203ENST00000456089 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
TREX1-203ENST00000456089 BORCS7-ASMTA0A0B4J1R7 106 aa9.16□□□□□ -0.94
TREX1-203ENST00000456089 TRAV12-3A0A0B4J271 114 aa9.16□□□□□ -0.94
TREX1-203ENST00000456089 SLC25A5P05141 298 aaKnown RBP9.16□□□□□ -0.94
TREX1-203ENST00000456089 DEFB130BP0DP73 79 aa9.16□□□□□ -0.94
TREX1-203ENST00000456089 DEFB130AP0DP74 79 aa9.16□□□□□ -0.94
TREX1-203ENST00000456089 FAM74A1Q5RGS3 127 aa9.16□□□□□ -0.94
TREX1-203ENST00000456089 ZNF493Q6ZR52 646 aa9.16□□□□□ -0.94
TREX1-203ENST00000456089 UBE2DNLQ8IWF7 75 aa9.16□□□□□ -0.94
TREX1-203ENST00000456089 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.94
TREX1-203ENST00000456089 PRSS29PA6NIE9 313 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.94
TREX1-203ENST00000456089 MBP02144 154 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 GPX1P07203 203 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 AZU1P20160 251 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 RNASE4P34096 147 aaKnown RBP9.15□□□□□ -0.94
TREX1-203ENST00000456089 RAB2AP61019 212 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 KIR3DS1Q14943 382 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 TMEM88Q6PEY1 159 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 PQLC2Q6ZP29 291 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 CMTM2Q8TAZ6 248 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 RXFP4Q8TDU9 374 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
TREX1-203ENST00000456089 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 FAM210BQ96KR6 192 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 HYLS1Q96M11 299 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 AGPAT4-IT1Q9H0P7 198 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 Q9H3A6 140 aa9.15□□□□□ -0.94
TREX1-203ENST00000456089 TIMM8BQ9Y5J9 83 aaPredicted RBP9.15□□□□□ -0.94
TREX1-203ENST00000456089 C7orf71A4D174 169 aa9.14□□□□□ -0.95
TREX1-203ENST00000456089 SNURFLB1AK76 121 aa9.14□□□□□ -0.95
TREX1-203ENST00000456089 CDC34P49427 236 aaPredicted RBP9.14□□□□□ -0.95
TREX1-203ENST00000456089 SERF2P84101 59 aa9.14□□□□□ -0.95
TREX1-203ENST00000456089 Q5BKY6 102 aa9.14□□□□□ -0.95
TREX1-203ENST00000456089 LINC00336Q6ZUF6 198 aa9.14□□□□□ -0.95
TREX1-203ENST00000456089 PYGO2Q9BRQ0 406 aa9.14□□□□□ -0.95
TREX1-203ENST00000456089 PSMG3Q9BT73 122 aaPredicted RBP9.14□□□□□ -0.95
TREX1-203ENST00000456089 NOP10Q9NPE3 64 aaKnown RBP9.14□□□□□ -0.95
TREX1-203ENST00000456089 PCLOQ9Y6V0 5065 aa9.14□□□□□ -0.95
TREX1-203ENST00000456089 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
TREX1-203ENST00000456089 ATP6V0CP27449 155 aa9.13□□□□□ -0.95
TREX1-203ENST00000456089 ZNF138P52744 262 aa9.13□□□□□ -0.95
TREX1-203ENST00000456089 OR2G3Q8NGZ4 309 aa9.13□□□□□ -0.95
TREX1-203ENST00000456089 GNPNAT1Q96EK6 184 aaPredicted RBP9.13□□□□□ -0.95
TREX1-203ENST00000456089 ZNF503Q96F45 646 aa9.13□□□□□ -0.95
TREX1-203ENST00000456089 VGLL1Q99990 258 aa9.13□□□□□ -0.95
TREX1-203ENST00000456089 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
TREX1-203ENST00000456089 RPH3ALQ9UNE2 315 aa9.13□□□□□ -0.95
TREX1-203ENST00000456089 MUC4Q99102 2169 aa9.13□□□□□ -0.95
TREX1-203ENST00000456089 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 RBAKDNA6NC62 111 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 PGPA6NDG6 321 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 CBY3A6NI87 242 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 RGS13O14921 159 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 EIF3GO75821 320 aaKnown RBP eCLIP9.12□□□□□ -0.95
TREX1-203ENST00000456089 ATP5G1P05496 136 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 NMBP08949 121 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 ATP5G3P48201 142 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 RNASE8Q8TDE3 154 aaKnown RBP9.12□□□□□ -0.95
TREX1-203ENST00000456089 ACTR3CQ9C0K3 210 aaPredicted RBP9.12□□□□□ -0.95
TREX1-203ENST00000456089 ZNF492Q9P255 531 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 TNFSF18Q9UNG2 199 aa9.12□□□□□ -0.95
TREX1-203ENST00000456089 KLLNB2CW77 178 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 F5H768 121 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 ARPC5O15511 151 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 ARL14EPLP0DKL9 152 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 CRISP2P16562 243 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 CD300CQ08708 224 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 LGALS9BQ3B8N2 356 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 Q6ZR54 194 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 IQCF2Q8IXL9 164 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 ZNF680Q8NEM1 530 aa9.11□□□□□ -0.95
TREX1-203ENST00000456089 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
TREX1-203ENST00000456089 RNF222A6NCQ9 220 aa9.1□□□□□ -0.95
TREX1-203ENST00000456089 DIRC3C9JPN6 131 aa9.1□□□□□ -0.95
TREX1-203ENST00000456089 TAAR5O14804 337 aa9.1□□□□□ -0.95
TREX1-203ENST00000456089 RPL7L1Q6DKI1 246 aaKnown RBP9.1□□□□□ -0.95
TREX1-203ENST00000456089 EIF4E3Q8N5X7 224 aaKnown RBP9.1□□□□□ -0.95
TREX1-203ENST00000456089 Q8TAT8 98 aa9.1□□□□□ -0.95
TREX1-203ENST00000456089 RAB24Q969Q5 203 aa9.1□□□□□ -0.95
TREX1-203ENST00000456089 FAM19A4Q96LR4 140 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms