RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 LINC01587Q99440 93 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 NPIPB5A8MRT5 1133 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 PSG1P11464 419 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 C6orf226Q5I0X4 101 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 PRR15LQ9BU68 103 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 KAAG1Q9UBP8 84 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 PCSK5Q92824 1860 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 MSGN1A6NI15 193 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 ATP5J2P56134 94 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 TFF3Q07654 80 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 C20orf173Q96LM9 149 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 SIGLEC9Q9Y336 463 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 CRLF1O75462 422 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 EIF4EBP1Q13541 118 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-204ENST00000455883 STHQ8IWL8 128 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 TMEM219Q86XT9 240 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 IGHV4-39P01824 125 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 THBDP07204 575 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 CEACAM8P31997 349 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-204ENST00000455883 CECR9P0C854 216 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 K7EM74 188 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 MIR17HGQ75NE6 70 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 SDHAF1A6NFY7 115 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 H7C423 109 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 CRYBA2P53672 197 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 LINC00158P58513 81 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 MRPL55Q7Z7F7 128 aaKnown RBP4.25□□□□□ -1.73
CSMD3-204ENST00000455883 FZR1Q9UM11 496 aa4.25□□□□□ -1.73
CSMD3-204ENST00000455883 IGHV1-58A0A0C4DH39 117 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 C9JAW5 83 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 ANXA2RQ3ZCQ2 193 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 LCNL1Q6ZST4 164 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 K7ERS5 55 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 IGKV1D-33P01593 117 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 IGKV1-33P01594 117 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 TIMM17AQ99595 171 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 FOXQ1Q9C009 403 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 TRGV4A0A0C4DH28 118 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 IGHG3P01860 377 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 ZFP2Q6ZN57 461 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 LINC00643Q86TS7 51 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 CYTL1Q9NRR1 136 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-204ENST00000455883 Q8N1Y9 231 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 TMEM243Q9BU79 118 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 ZNF826PQ6ZT77 177 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 UTP20O75691 2785 aaKnown RBP4.24□□□□□ -1.73
CSMD3-204ENST00000455883 C5orf63A6NC05 138 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 QRFPP83859 136 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 A0A0U1RQS6 177 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 MED19A0JLT2 244 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-204ENST00000455883 C17orf98A8MV24 154 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 NDUFC2-KCTD14E9PQ53 114 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 NDUFA4O00483 81 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 THAP8Q8NA92 274 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 MYF5P13349 255 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 RNASE4P34096 147 aaKnown RBP4.24□□□□□ -1.73
CSMD3-204ENST00000455883 SYNJ2BPP57105 145 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 ZNF319Q9P2F9 582 aa4.24□□□□□ -1.73
CSMD3-204ENST00000455883 TRAV41A0A0B4J266 112 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 COL4A6Q14031 1691 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 A0A0B4J2C4 111 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 FSTL3O95633 263 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 IGKV3-15P01624 115 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 IGHV3-7P01780 117 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 CRIM1Q9NZV1 1036 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 HILPDAQ9Y5L2 63 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 J3QQQ9 107 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 IGHV1-8P0DP01 117 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 APOC4P55056 127 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 ALKBH6Q3KRA9 238 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 A0A1B0GUS0 222 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 A0A1W2PRD5 423 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 LINC01619G3V211 115 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 LCN12Q6JVE5 192 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 SRRM4A7MD48 611 aaKnown RBP4.23□□□□□ -1.73
CSMD3-204ENST00000455883 ITGBL1O95965 494 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-204ENST00000455883 HTN1P15515 57 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 ETDBQ3ZM63 59 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 NKAPP1Q8N9T2 125 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 OPRPNQ99935 248 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-204ENST00000455883 A0A1B0GX51 115 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 TMEM89A2RUT3 159 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 RBM3P98179 157 aaKnown RBP4.23□□□□□ -1.73
CSMD3-204ENST00000455883 C9orf47Q6ZRZ4 202 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 ZNF329Q86UD4 541 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 NABP1Q96AH0 204 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 ARRDC1-AS1Q9H2J1 176 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 GAS1P54826 345 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 ATRAIDQ6UW56 229 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 B4DSR2 109 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 CSRP1P21291 193 aaKnown RBP4.23□□□□□ -1.73
CSMD3-204ENST00000455883 SLC25A29Q8N8R3 303 aa4.23□□□□□ -1.73
CSMD3-204ENST00000455883 FGF6P10767 208 aa4.22□□□□□ -1.73
CSMD3-204ENST00000455883 Q6Q795 121 aa4.22□□□□□ -1.73
CSMD3-204ENST00000455883 RNF224P0DH78 156 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms