RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 LINC01620Q4KN68 170 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 MBNL2Q5VZF2 373 aaKnown RBP6.57□□□□□ -1.36
SMCO1-202ENST00000452776 MDP1Q86V88 176 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 RPP25Q9BUL9 199 aaKnown RBP6.57□□□□□ -1.36
SMCO1-202ENST00000452776 ADAMTS20P59510 1910 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 A0A0B4J2C4 111 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 A0A1W2PR77 199 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 ZNF503-AS2A6NEH8 195 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 RPL7P18124 248 aaKnown RBP6.56□□□□□ -1.36
SMCO1-202ENST00000452776 CXCL5P42830 114 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 EBI3Q14213 229 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 XP32Q5T750 250 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 Q6ZQT7 251 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 SLC25A29Q8N8R3 303 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
SMCO1-202ENST00000452776 SMKR1H3BMG3 65 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 COX6CP09669 75 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 CRYGAP11844 174 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 UCNP55089 124 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 ZNF56Q15929 161 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 VMA21Q3ZAQ7 101 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 GAGE2AQ6NT46 116 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 TDHQ8IZJ6 230 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 EXOC3-AS1Q8N2X6 119 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 SCGB3A1Q96QR1 104 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 PRR25Q96S07 402 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 DCTN5Q9BTE1 182 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 IGFLR1Q9H665 355 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 FSCN3Q9NQT6 498 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 TANC2Q9HCD6 1990 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 TRBV30A0A0K0K1B3 111 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 SRRM5B3KS81 715 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 WT1-ASQ06250 92 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 C17orf58Q2M2W7 97 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 OXLD1Q5BKU9 147 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 SIGLEC15Q6ZMC9 328 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 ZNF826PQ6ZT77 177 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 NEXN-AS1Q8NBZ9 246 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 KLF14Q8TD94 323 aaPredicted RBP6.55□□□□□ -1.36
SMCO1-202ENST00000452776 TOMM6Q96B49 74 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 SHANK2-AS3Q9BTD1 123 aa6.55□□□□□ -1.36
SMCO1-202ENST00000452776 ZNF407Q9C0G0 2248 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 A0A0J9YY99 117 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 PPP1R17O96001 155 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 IGHV3-30P01768 117 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 CRYGBP07316 175 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 CD3EP07766 207 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 IGHV3-30-5P0DP03 117 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 COX6A1P12074 109 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 COX6B1P14854 86 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 COX7CP15954 63 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 C1orf229Q6ZS94 237 aaPredicted RBP6.54□□□□□ -1.36
SMCO1-202ENST00000452776 ZNF833PQ6ZTB9 187 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 LINC00643Q86TS7 51 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 DUX5Q96PT3 197 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 GON4LQ3T8J9 2241 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 HCFC1P51610 2035 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 MYO9BQ13459 2157 aa6.54□□□□□ -1.36
SMCO1-202ENST00000452776 ESPL1Q14674 2120 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 CENPFP49454 3210 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 UNC13CQ8NB66 2214 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 J3QL48 77 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 TIMM8AO60220 97 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-202ENST00000452776 IGHV3-33P01772 117 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 TRACP01848 142 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 SPINK2P20155 84 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 TET2Q6N021 2002 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-202ENST00000452776 C2orf82Q6UX34 121 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 IL17RELQ6ZVW7 336 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 RPUSD1Q9UJJ7 312 aaKnown RBP6.53□□□□□ -1.36
SMCO1-202ENST00000452776 ZNF256Q9Y2P7 627 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-202ENST00000452776 PTPRBP23467 1997 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 SEC16AO15027 2179 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 IGKV1D-17A0A075B6S4 117 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 F8WDY8 70 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 IGKV1-16P04430 117 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 IGFBP4P22692 258 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 DLX6P56179 175 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 NXPH1P58417 271 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 TMEM258P61165 79 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 LYZP61626 148 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 IL11RAQ14626 422 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 HES3Q5TGS1 186 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 DTX2Q86UW9 622 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 POM121L12Q8N7R1 296 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 ASCL2Q99929 193 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 VKORC1Q9BQB6 163 aa6.53□□□□□ -1.36
SMCO1-202ENST00000452776 LINC01548A6NM66 108 aa6.52□□□□□ -1.37
SMCO1-202ENST00000452776 F5H768 121 aa6.52□□□□□ -1.37
SMCO1-202ENST00000452776 H3BRN7 92 aa6.52□□□□□ -1.37
SMCO1-202ENST00000452776 EGR2P11161 476 aaPredicted RBP6.52□□□□□ -1.37
SMCO1-202ENST00000452776 WT1P19544 449 aaPredicted RBP6.52□□□□□ -1.37
SMCO1-202ENST00000452776 ZNF672Q499Z4 452 aaPredicted RBP6.52□□□□□ -1.37
SMCO1-202ENST00000452776 SFTA2Q6UW10 78 aa6.52□□□□□ -1.37
SMCO1-202ENST00000452776 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
SMCO1-202ENST00000452776 C8orf31Q8N9H6 132 aa6.52□□□□□ -1.37
SMCO1-202ENST00000452776 DUX3Q96PT4 197 aa6.52□□□□□ -1.37
SMCO1-202ENST00000452776 TRGV11A0A075B6L2 103 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms