RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 HSD17B11Q8NBQ5 300 aa13.04□□□□□ -0.32
PDLIM2-214ENST00000452226 PHYHIPLQ96FC7 376 aa13.04□□□□□ -0.32
PDLIM2-214ENST00000452226 NACAE9PAV3 2078 aa13.03□□□□□ -0.32
PDLIM2-214ENST00000452226 MED14OSP0DP75 135 aa13.03□□□□□ -0.32
PDLIM2-214ENST00000452226 TSPOP30536 169 aa13.03□□□□□ -0.32
PDLIM2-214ENST00000452226 LYPD1Q8N2G4 141 aa13.03□□□□□ -0.32
PDLIM2-214ENST00000452226 C20orf144Q9BQM9 153 aa13.03□□□□□ -0.32
PDLIM2-214ENST00000452226 ZNF705GA8MUZ8 300 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 RTL8CO15255 209 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 EIF3GO75821 320 aaKnown RBP eCLIP13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 PRM2P04554 102 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 UBE2L3P68036 154 aaKnown RBP13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 SERF2P84101 59 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 LGALS9BQ3B8N2 356 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 RPL7L1Q6DKI1 246 aaKnown RBP13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 PQLC2Q6ZP29 291 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 C9orf47Q6ZRZ4 202 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 OR10G4Q8NGN3 311 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 OR10G9Q8NGN4 311 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 OR10G7Q8NGN6 311 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 FAM19A4Q96LR4 140 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 LINC00477Q96M19 166 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 AGPAT4-IT1Q9H0P7 198 aa13.02□□□□□ -0.33
PDLIM2-214ENST00000452226 IGLV2-18A0A075B6J9 118 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 A0A1B0GVY2 172 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 A0A1W2PPV4 95 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 PRSS29PA6NIE9 313 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 TAS2R60P59551 318 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 ERCC8Q13216 396 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 GFI1BQ5VTD9 330 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 FAM122CQ6P4D5 195 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 TMEM88Q6PEY1 159 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 LINC01587Q99440 93 aa13.01□□□□□ -0.33
PDLIM2-214ENST00000452226 MBP02144 154 aa13□□□□□ -0.33
PDLIM2-214ENST00000452226 AZU1P20160 251 aa13□□□□□ -0.33
PDLIM2-214ENST00000452226 LEPP41159 167 aa13□□□□□ -0.33
PDLIM2-214ENST00000452226 RANP62826 216 aaKnown RBP13□□□□□ -0.33
PDLIM2-214ENST00000452226 GNPNAT1Q96EK6 184 aaPredicted RBP13□□□□□ -0.33
PDLIM2-214ENST00000452226 SH3BGRL3Q9H299 93 aa13□□□□□ -0.33
PDLIM2-214ENST00000452226 Q9H3A6 140 aa13□□□□□ -0.33
PDLIM2-214ENST00000452226 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 BORCS7-ASMTA0A0B4J1R7 106 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 PLAC8L1A1L4L8 177 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 SMLR1H3BR10 107 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 H7BYZ3 331 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 STAG3L2P0CL84 134 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 STAG3L3P0CL85 134 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 RNF212Q495C1 297 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 VGLL1Q99990 258 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 CYTL1Q9NRR1 136 aa12.99□□□□□ -0.33
PDLIM2-214ENST00000452226 LYRM9A8MSI8 78 aa12.98□□□□□ -0.33
PDLIM2-214ENST00000452226 KLLNB2CW77 178 aa12.98□□□□□ -0.33
PDLIM2-214ENST00000452226 TAAR5O14804 337 aa12.98□□□□□ -0.33
PDLIM2-214ENST00000452226 ARPC5O15511 151 aa12.98□□□□□ -0.33
PDLIM2-214ENST00000452226 CRISP2P16562 243 aa12.98□□□□□ -0.33
PDLIM2-214ENST00000452226 SOHLH1Q5JUK2 328 aa12.98□□□□□ -0.33
PDLIM2-214ENST00000452226 RAB24Q969Q5 203 aa12.98□□□□□ -0.33
PDLIM2-214ENST00000452226 PKD1P98161 4303 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 RBAKDNA6NC62 111 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 HMGB3O15347 200 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 SLC25A5P05141 298 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 NMBP08949 121 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 DEFB130BP0DP73 79 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 DEFB130AP0DP74 79 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 ZNF493Q6ZR52 646 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 Q6ZR54 194 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 OR11H4Q8NGC9 324 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 SUN5Q8TC36 379 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 ZNF492Q9P255 531 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 MUC4Q99102 2169 aa12.97□□□□□ -0.33
PDLIM2-214ENST00000452226 TRBV7-9A0A0J9YWB2 115 aa12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 HMSDA8MTL9 139 aa12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 CSN1S1P47710 185 aa12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 TMEM78Q5T7P6 136 aa12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 ARL6IP6Q8N6S5 226 aa12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 C15orf53Q8NAA6 179 aa12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 RNASE8Q8TDE3 154 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 RXFP4Q8TDU9 374 aa12.96□□□□□ -0.33
PDLIM2-214ENST00000452226 TRAV12-3A0A0B4J271 114 aa12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 C7orf71A4D174 169 aa12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 DIRC3C9JPN6 131 aa12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 J3KRW8 73 aa12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 ZNF324O75467 553 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 ZNF345Q14585 488 aa12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 KCNRGQ8N5I3 272 aa12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 ZFAND2AQ8N6M9 145 aa12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 TMEM263Q8WUH6 116 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 C16orf74Q96GX8 76 aa12.95□□□□□ -0.34
PDLIM2-214ENST00000452226 DYNC1H1Q14204 4646 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-214ENST00000452226 PGPA6NDG6 321 aa12.94□□□□□ -0.34
PDLIM2-214ENST00000452226 HTN1P15515 57 aa12.94□□□□□ -0.34
PDLIM2-214ENST00000452226 ZNF138P52744 262 aa12.94□□□□□ -0.34
PDLIM2-214ENST00000452226 CD300CQ08708 224 aa12.94□□□□□ -0.34
PDLIM2-214ENST00000452226 PYGO2Q9BRQ0 406 aa12.94□□□□□ -0.34
PDLIM2-214ENST00000452226 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
PDLIM2-214ENST00000452226 DNAH11Q96DT5 4516 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms