RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 TRAV12-2A0A075B6T6 113 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 IGKV2-40A0A087WW87 121 aaPredicted RBP10.32□□□□□ -0.76
COL3A1-203ENST00000450867 KLLNB2CW77 178 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 UMAD1C9J7I0 102 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 DIRC3C9JPN6 131 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 DEFB4AO15263 64 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 PFDN1O60925 122 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 IGKV2D-40P01614 121 aaPredicted RBP10.32□□□□□ -0.76
COL3A1-203ENST00000450867 CSN1S1P47710 185 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 ERCC8Q13216 396 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 FAM74A1Q5RGS3 127 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 GFI1BQ5VTD9 330 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 TMED6Q8WW62 240 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 VGLL1Q99990 258 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
COL3A1-203ENST00000450867 A0A1B0GVG6 124 aa10.31□□□□□ -0.76
COL3A1-203ENST00000450867 PGPA6NDG6 321 aa10.31□□□□□ -0.76
COL3A1-203ENST00000450867 HBE1P02100 147 aa10.31□□□□□ -0.76
COL3A1-203ENST00000450867 TPT1P13693 172 aaKnown RBP10.31□□□□□ -0.76
COL3A1-203ENST00000450867 KIR3DS1Q14943 382 aa10.31□□□□□ -0.76
COL3A1-203ENST00000450867 TMEM78Q5T7P6 136 aa10.31□□□□□ -0.76
COL3A1-203ENST00000450867 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
COL3A1-203ENST00000450867 LENEPQ9Y5L5 61 aa10.31□□□□□ -0.76
COL3A1-203ENST00000450867 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 A0A1W2PRE2 83 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 H7BYZ3 331 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 ZNF138P52744 262 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 CD300CQ08708 224 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 RRN3P1Q2M238 152 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 DPPA3Q6W0C5 159 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 ZFAND2AQ8N6M9 145 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 C5orf17Q8NAS9 161 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 TMEM208Q9BTX3 173 aa10.3□□□□□ -0.76
COL3A1-203ENST00000450867 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 LOC102723971A0A1B0GUV8 181 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 SERTM2A0A1B0GWG4 89 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 MAP1LC3B2A6NCE7 125 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 GGTLC3B5MD39 225 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 TAS2R60P59551 318 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 C9orf62Q8N4C0 152 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 CMTM2Q8TAZ6 248 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 MBD3L1Q8WWY6 194 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 MAP1LC3BQ9GZQ8 125 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 CELA1Q9UNI1 258 aa10.29□□□□□ -0.76
COL3A1-203ENST00000450867 PLAC8L1A1L4L8 177 aa10.28□□□□□ -0.76
COL3A1-203ENST00000450867 C7orf71A4D174 169 aa10.28□□□□□ -0.76
COL3A1-203ENST00000450867 NUPR2A6NF83 97 aa10.28□□□□□ -0.76
COL3A1-203ENST00000450867 FHITP49789 147 aa10.28□□□□□ -0.76
COL3A1-203ENST00000450867 NANOS2P60321 138 aaKnown RBP10.28□□□□□ -0.76
COL3A1-203ENST00000450867 LINC00467Q9BRT7 94 aa10.28□□□□□ -0.76
COL3A1-203ENST00000450867 ARL2-SNX15V9GYD0 113 aa10.28□□□□□ -0.76
COL3A1-203ENST00000450867 ALMS1Q8TCU4 4167 aa10.28□□□□□ -0.76
COL3A1-203ENST00000450867 CXorf65A6NEN9 183 aa10.27□□□□□ -0.77
COL3A1-203ENST00000450867 ZNF705GA8MUZ8 300 aaPredicted RBP10.27□□□□□ -0.77
COL3A1-203ENST00000450867 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.77
COL3A1-203ENST00000450867 TCRAP04437 139 aa10.27□□□□□ -0.77
COL3A1-203ENST00000450867 EIF5AL1Q6IS14 154 aaKnown RBP10.27□□□□□ -0.77
COL3A1-203ENST00000450867 CEMP1Q6PRD7 247 aaPredicted RBP10.27□□□□□ -0.77
COL3A1-203ENST00000450867 ZNF493Q6ZR52 646 aa10.27□□□□□ -0.77
COL3A1-203ENST00000450867 SLC51BQ86UW2 128 aa10.27□□□□□ -0.77
COL3A1-203ENST00000450867 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
COL3A1-203ENST00000450867 LINC01587Q99440 93 aa10.27□□□□□ -0.77
COL3A1-203ENST00000450867 PYGO2Q9BRQ0 406 aa10.27□□□□□ -0.77
COL3A1-203ENST00000450867 NKX6-2Q9C056 277 aaPredicted RBP10.27□□□□□ -0.77
COL3A1-203ENST00000450867 TMPRSS5Q9H3S3 457 aa10.27□□□□□ -0.77
COL3A1-203ENST00000450867 DKK2Q9UBU2 259 aa10.27□□□□□ -0.77
COL3A1-203ENST00000450867 TRAV12-3A0A0B4J271 114 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 C11orf94C9JXX5 98 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 SPART-AS1P0CW21 52 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 RAB5CP51148 216 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 FGF8P55075 233 aaPredicted RBP10.26□□□□□ -0.77
COL3A1-203ENST00000450867 SUMO1P63165 101 aaKnown RBP10.26□□□□□ -0.77
COL3A1-203ENST00000450867 PMS2P11Q13670 270 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 PRR9Q5T870 116 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 GOLT1AQ6ZVE7 132 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 Q8TAT8 98 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 RNASE8Q8TDE3 154 aaKnown RBP10.26□□□□□ -0.77
COL3A1-203ENST00000450867 TMEM263Q8WUH6 116 aaKnown RBP10.26□□□□□ -0.77
COL3A1-203ENST00000450867 NIPSNAP3BQ9BS92 247 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 EPDR1Q9UM22 224 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 YTHDF2Q9Y5A9 579 aaKnown RBP10.26□□□□□ -0.77
COL3A1-203ENST00000450867 DNAH1Q9P2D7 4330 aa10.26□□□□□ -0.77
COL3A1-203ENST00000450867 FBLL1A6NHQ2 334 aaKnown RBP10.25□□□□□ -0.77
COL3A1-203ENST00000450867 FAM74A7A6NL05 159 aa10.25□□□□□ -0.77
COL3A1-203ENST00000450867 LYRM9A8MSI8 78 aa10.25□□□□□ -0.77
COL3A1-203ENST00000450867 GPX1P07203 203 aa10.25□□□□□ -0.77
COL3A1-203ENST00000450867 AZU1P20160 251 aa10.25□□□□□ -0.77
COL3A1-203ENST00000450867 GNG5P63218 68 aa10.25□□□□□ -0.77
COL3A1-203ENST00000450867 BTN1A1Q13410 526 aa10.25□□□□□ -0.77
COL3A1-203ENST00000450867 FAM213BQ8TBF2 198 aa10.25□□□□□ -0.77
COL3A1-203ENST00000450867 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
COL3A1-203ENST00000450867 TRAV1-1A0A0B4J248 108 aa10.24□□□□□ -0.77
COL3A1-203ENST00000450867 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
COL3A1-203ENST00000450867 PRM2P04554 102 aa10.24□□□□□ -0.77
COL3A1-203ENST00000450867 FAM222AQ5U5X8 452 aa10.24□□□□□ -0.77
COL3A1-203ENST00000450867 Q6AWC8 147 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms