RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 MIC13Q5XKP0 118 aa9.15□□□□□ -0.94
HMGB3-204ENST00000448905 VSIG2Q96IQ7 327 aa9.15□□□□□ -0.94
HMGB3-204ENST00000448905 SLC39A9Q9NUM3 307 aa9.15□□□□□ -0.94
HMGB3-204ENST00000448905 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
HMGB3-204ENST00000448905 PRO0255Q9UI72 69 aa9.15□□□□□ -0.94
HMGB3-204ENST00000448905 WDR83OSQ9Y284 106 aa9.15□□□□□ -0.94
HMGB3-204ENST00000448905 LSM5Q9Y4Y9 91 aaKnown RBP9.15□□□□□ -0.94
HMGB3-204ENST00000448905 RGS13O14921 159 aa9.14□□□□□ -0.95
HMGB3-204ENST00000448905 ZNF324O75467 553 aaPredicted RBP9.14□□□□□ -0.95
HMGB3-204ENST00000448905 ERCC8Q13216 396 aa9.14□□□□□ -0.95
HMGB3-204ENST00000448905 PDE6HQ13956 83 aa9.14□□□□□ -0.95
HMGB3-204ENST00000448905 ATP6V1FQ16864 119 aa9.14□□□□□ -0.95
HMGB3-204ENST00000448905 TMEM78Q5T7P6 136 aa9.14□□□□□ -0.95
HMGB3-204ENST00000448905 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
HMGB3-204ENST00000448905 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
HMGB3-204ENST00000448905 KLLNB2CW77 178 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 K7EP13 123 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 SPINK4O60575 86 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 SULT1A1P50225 295 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 BAXQ07812 192 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 MRPL23Q16540 153 aaKnown RBP9.13□□□□□ -0.95
HMGB3-204ENST00000448905 IBA57Q5T440 356 aaKnown RBP9.13□□□□□ -0.95
HMGB3-204ENST00000448905 STX12Q86Y82 276 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 CHAC2Q8WUX2 184 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 ST6GAL2Q96JF0 529 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 AGPAT4-IT1Q9H0P7 198 aa9.13□□□□□ -0.95
HMGB3-204ENST00000448905 GPN1Q9HCN4 374 aaPredicted RBP9.13□□□□□ -0.95
HMGB3-204ENST00000448905 FAM24AA6NFZ4 105 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 M0R3E3 92 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 NXPH4O95158 308 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 CD300CQ08708 224 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 BLNKQ8WV28 456 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 C2orf50Q96LR7 162 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 KLF12Q9Y4X4 402 aa9.12□□□□□ -0.95
HMGB3-204ENST00000448905 APOBP04114 4563 aaKnown RBP9.11□□□□□ -0.95
HMGB3-204ENST00000448905 CCSO14618 274 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 CRISP2P16562 243 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 TCL1AP56279 114 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 BTN1A1Q13410 526 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 VWC2Q2TAL6 325 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 LYPD5Q6UWN5 251 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 NEGR1Q7Z3B1 354 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 FAM19A4Q96LR4 140 aa9.11□□□□□ -0.95
HMGB3-204ENST00000448905 IGHV1OR15-1A0A075B7D0 117 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 UBE2L5PA0A1B0GUS4 154 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 PRAF2O60831 178 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 IGHV3-53P01767 116 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 INAFM2P0DMQ5 153 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 IL7P13232 177 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 FGF7P21781 194 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 EVI2AP22794 236 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 S100A10P60903 97 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 ICAM4Q14773 271 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 EXOC3-AS1Q8N2X6 119 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 MRPL32Q9BYC8 188 aaKnown RBP9.1□□□□□ -0.95
HMGB3-204ENST00000448905 LYRM2Q9NU23 88 aaPredicted RBP9.1□□□□□ -0.95
HMGB3-204ENST00000448905 LY96Q9Y6Y9 160 aa9.1□□□□□ -0.95
HMGB3-204ENST00000448905 DNAH5Q8TE73 4624 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 TRGV4A0A0C4DH28 118 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 TRBV7-9A0A0J9YWB2 115 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 NDUFB4O95168 129 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 TCRBP04435 133 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 NBEAP1P0C6P0 100 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 BTCP35070 178 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 CSN1S1P47710 185 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 ZNF138P52744 262 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 CRYBA4P53673 196 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 FAM122CQ6P4D5 195 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 Q6ZRN7 208 aaPredicted RBP9.09□□□□□ -0.95
HMGB3-204ENST00000448905 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 TMEM252Q8N6L7 170 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 PCNPQ8WW12 178 aaKnown RBP9.09□□□□□ -0.95
HMGB3-204ENST00000448905 FRZBQ92765 325 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 C8orf49Q96NF6 230 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 VGLL1Q99990 258 aa9.09□□□□□ -0.95
HMGB3-204ENST00000448905 LYRM1O43325 122 aa9.08□□□□□ -0.96
HMGB3-204ENST00000448905 ORM1P02763 201 aa9.08□□□□□ -0.96
HMGB3-204ENST00000448905 PYYP10082 97 aa9.08□□□□□ -0.96
HMGB3-204ENST00000448905 ZNF415Q09FC8 603 aa9.08□□□□□ -0.96
HMGB3-204ENST00000448905 IQCF2Q8IXL9 164 aa9.08□□□□□ -0.96
HMGB3-204ENST00000448905 OR51M1Q9H341 326 aa9.08□□□□□ -0.96
HMGB3-204ENST00000448905 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
HMGB3-204ENST00000448905 ZNF492Q9P255 531 aa9.08□□□□□ -0.96
HMGB3-204ENST00000448905 TRAV6A0A075B6T7 132 aa9.07□□□□□ -0.96
HMGB3-204ENST00000448905 E5RGE8 158 aa9.07□□□□□ -0.96
HMGB3-204ENST00000448905 SRIP30626 198 aa9.07□□□□□ -0.96
HMGB3-204ENST00000448905 FHL2Q14192 279 aa9.07□□□□□ -0.96
HMGB3-204ENST00000448905 SDHCQ99643 169 aaPredicted RBP9.07□□□□□ -0.96
HMGB3-204ENST00000448905 KCNIP2Q9NS61 270 aa9.07□□□□□ -0.96
HMGB3-204ENST00000448905 MSRB1Q9NZV6 116 aa9.07□□□□□ -0.96
HMGB3-204ENST00000448905 TP53TG3Q9ULZ0 132 aa9.07□□□□□ -0.96
HMGB3-204ENST00000448905 HERC1Q15751 4861 aa9.06□□□□□ -0.96
HMGB3-204ENST00000448905 IGKV2-40A0A087WW87 121 aaPredicted RBP9.06□□□□□ -0.96
HMGB3-204ENST00000448905 IGSF23A1L1A6 192 aa9.06□□□□□ -0.96
HMGB3-204ENST00000448905 PLA2G10O15496 165 aa9.06□□□□□ -0.96
HMGB3-204ENST00000448905 IGKV2D-40P01614 121 aaPredicted RBP9.06□□□□□ -0.96
HMGB3-204ENST00000448905 RAB32Q13637 225 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms