RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 PRR25Q96S07 402 aa12.42□□□□□ -0.42
CHRD-205ENST00000448472 ZNF207O43670 478 aaKnown RBP12.42□□□□□ -0.42
CHRD-205ENST00000448472 GAS8-AS1O95177 125 aa12.42□□□□□ -0.42
CHRD-205ENST00000448472 ZC2HC1BQ5TFG8 222 aa12.42□□□□□ -0.42
CHRD-205ENST00000448472 A0A1W2PPM0 123 aa12.41□□□□□ -0.42
CHRD-205ENST00000448472 RPS20P60866 119 aaKnown RBP12.41□□□□□ -0.42
CHRD-205ENST00000448472 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
CHRD-205ENST00000448472 FGF6P10767 208 aa12.41□□□□□ -0.42
CHRD-205ENST00000448472 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
CHRD-205ENST00000448472 ECSCRQ19T08 205 aa12.41□□□□□ -0.42
CHRD-205ENST00000448472 DPM3Q9P2X0 92 aa12.41□□□□□ -0.42
CHRD-205ENST00000448472 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.4□□□□□ -0.42
CHRD-205ENST00000448472 RNF182Q8N6D2 247 aa12.4□□□□□ -0.42
CHRD-205ENST00000448472 TMEM158Q8WZ71 300 aa12.4□□□□□ -0.42
CHRD-205ENST00000448472 ABHD17AQ96GS6 310 aa12.4□□□□□ -0.42
CHRD-205ENST00000448472 RAB1BQ9H0U4 201 aa12.4□□□□□ -0.42
CHRD-205ENST00000448472 FXYD2P54710 66 aa12.4□□□□□ -0.42
CHRD-205ENST00000448472 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
CHRD-205ENST00000448472 NCOR2Q9Y618 2525 aa12.4□□□□□ -0.42
CHRD-205ENST00000448472 CHD8Q9HCK8 2581 aa12.4□□□□□ -0.42
CHRD-205ENST00000448472 SCGB2A1O75556 95 aa12.4□□□□□ -0.43
CHRD-205ENST00000448472 CRYGBP07316 175 aa12.4□□□□□ -0.43
CHRD-205ENST00000448472 C8orf31Q8N9H6 132 aa12.4□□□□□ -0.43
CHRD-205ENST00000448472 NDUFA3O95167 84 aa12.39□□□□□ -0.43
CHRD-205ENST00000448472 IGF2RP11717 2491 aa12.39□□□□□ -0.43
CHRD-205ENST00000448472 IGKV2D-26A0A0A0MRZ7 120 aa12.39□□□□□ -0.43
CHRD-205ENST00000448472 LCNL1Q6ZST4 164 aa12.39□□□□□ -0.43
CHRD-205ENST00000448472 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
CHRD-205ENST00000448472 GTSF1LQ9H1H1 148 aa12.39□□□□□ -0.43
CHRD-205ENST00000448472 TMEM238C9JI98 176 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 TNFRSF6BO95407 300 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 IGKCP01834 107 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 MYOZ3Q8TDC0 251 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 TRAV26-2A0A0B4J265 109 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 TRAV40A0A0B4J280 105 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 FABP5P3A8MUU1 101 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 CEACAM3P40198 252 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 ARPC1AQ92747 370 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 KAAG1Q9UBP8 84 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 CSMD1Q96PZ7 3565 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 PRR30Q53SZ7 412 aaPredicted RBP12.38□□□□□ -0.43
CHRD-205ENST00000448472 SFTA2Q6UW10 78 aa12.38□□□□□ -0.43
CHRD-205ENST00000448472 SMAGPQ0VAQ4 97 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 DEFB104AQ8WTQ1 72 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 HIST1H4GQ99525 98 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 LRBAP50851 2863 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 ATRXP46100 2492 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 TMEM8BA6NDV4 472 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 ZNF493Q6ZR52 646 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 OR5A1Q8NGJ0 315 aa12.37□□□□□ -0.43
CHRD-205ENST00000448472 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
CHRD-205ENST00000448472 SHISA9B4DS77 424 aa12.36□□□□□ -0.43
CHRD-205ENST00000448472 B9A039 149 aa12.36□□□□□ -0.43
CHRD-205ENST00000448472 SPRY2O43597 315 aa12.36□□□□□ -0.43
CHRD-205ENST00000448472 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
CHRD-205ENST00000448472 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
CHRD-205ENST00000448472 PDE6HQ13956 83 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 AMTNQ6UX39 209 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 NPFFR1Q9GZQ6 430 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 IGKV3-7A0A075B6H7 116 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 G3V4G9 280 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 CEACAM4O75871 244 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 DPM2O94777 84 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 ZNF672Q499Z4 452 aaPredicted RBP12.35□□□□□ -0.43
CHRD-205ENST00000448472 IL17RELQ6ZVW7 336 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 CREBBPQ92793 2442 aa12.35□□□□□ -0.43
CHRD-205ENST00000448472 PRAC2D3DTV9 90 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 HOXB4P17483 251 aaPredicted RBP12.34□□□□□ -0.43
CHRD-205ENST00000448472 IGFL3Q6UXB1 125 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 DYNAPQ8N1N2 210 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 AKAP13Q12802 2813 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 UFSP1Q6NVU6 142 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 C16orf54Q6UWD8 224 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 TIMD4Q96H15 378 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 NXT2Q9NPJ8 142 aaKnown RBP12.34□□□□□ -0.43
CHRD-205ENST00000448472 MRPL35Q9NZE8 188 aaKnown RBP12.34□□□□□ -0.43
CHRD-205ENST00000448472 SAMD13Q5VXD3 122 aa12.34□□□□□ -0.43
CHRD-205ENST00000448472 TRBV25-1A0A075B6N4 114 aa12.33□□□□□ -0.43
CHRD-205ENST00000448472 EFNA4P52798 201 aa12.33□□□□□ -0.43
CHRD-205ENST00000448472 TNFRSF13BO14836 293 aaPredicted RBP12.33□□□□□ -0.44
CHRD-205ENST00000448472 DTX2Q86UW9 622 aa12.33□□□□□ -0.44
CHRD-205ENST00000448472 FANCD2OSQ96PS1 177 aa12.33□□□□□ -0.44
CHRD-205ENST00000448472 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
CHRD-205ENST00000448472 NDPQ00604 133 aa12.33□□□□□ -0.44
CHRD-205ENST00000448472 PIP4P1Q86T03 277 aa12.33□□□□□ -0.44
CHRD-205ENST00000448472 AGRNO00468 2067 aa12.33□□□□□ -0.44
CHRD-205ENST00000448472 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.33□□□□□ -0.444e-7■■■□□ 17.9
CHRD-205ENST00000448472 TRBV6-1A0A0K0K1D8 114 aa12.32□□□□□ -0.44
CHRD-205ENST00000448472 WI2-2373I1.2A0A1W2PRP0 233 aa12.32□□□□□ -0.44
CHRD-205ENST00000448472 CLEC3BP05452 202 aa12.32□□□□□ -0.44
CHRD-205ENST00000448472 S100A4P26447 101 aaKnown RBP12.32□□□□□ -0.44
CHRD-205ENST00000448472 TMEM78Q5T7P6 136 aa12.32□□□□□ -0.44
CHRD-205ENST00000448472 DPF1Q92782 380 aa12.32□□□□□ -0.44
CHRD-205ENST00000448472 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
CHRD-205ENST00000448472 ODF1Q14990 250 aa12.32□□□□□ -0.44
CHRD-205ENST00000448472 H3BMG7 143 aa12.32□□□□□ -0.44
CHRD-205ENST00000448472 M0R381 172 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms