RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 HAGHQ16775 308 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 LINC00322Q6ZN03 302 aaPredicted RBP8.52□□□□□ -1.05
LINC00408-201ENST00000447784 GOLT1AQ6ZVE7 132 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 ZNF767PQ75MW2 155 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 HIST1H2BAQ96A08 127 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 ATG101Q9BSB4 218 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 LEPP41159 167 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 ZNF138P52744 262 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 ERCC8Q13216 396 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 PMS2P11Q13670 270 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 CYB561D1Q8N8Q1 229 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 TXNDC17Q9BRA2 123 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 TM2D3Q9BRN9 247 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 AGPAT4-IT1Q9H0P7 198 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 ZMAT4Q9H898 229 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 VAX2Q9UIW0 290 aa8.51□□□□□ -1.05
LINC00408-201ENST00000447784 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
LINC00408-201ENST00000447784 PEX7O00628 323 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 BCL2P10415 239 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 ATP5G3P48201 142 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 FXYD7P58549 80 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 COL7A1Q02388 2944 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 C9orf47Q6ZRZ4 202 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 Q6ZWC4 215 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 RCHY1Q96PM5 261 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 VGLL1Q99990 258 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 NDFIP1Q9BT67 221 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 XCL2Q9UBD3 114 aa8.5□□□□□ -1.05
LINC00408-201ENST00000447784 RBFOX3A6NFN3 312 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 PDE6DO43924 150 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 CT45A10P0DMU9 189 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 AKR1C3P42330 323 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 CDKN1BP46527 198 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 UBE2G1P62253 170 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 MEF2BQ02080 365 aaPredicted RBP8.49□□□□□ -1.05
LINC00408-201ENST00000447784 SPINK13Q1W4C9 94 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
LINC00408-201ENST00000447784 ODF3Q96PU9 254 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 SPATA25Q9BR10 227 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 EIF5A2Q9GZV4 153 aaKnown RBP8.49□□□□□ -1.05
LINC00408-201ENST00000447784 SLC35B3Q9H1N7 401 aa8.49□□□□□ -1.05
LINC00408-201ENST00000447784 SORL1Q92673 2214 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 A8MTW9 85 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 J3KRW8 73 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 J3QL48 77 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 M0R2Z0 102 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 INSP01308 110 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 S100A9P06702 114 aaKnown RBP8.48□□□□□ -1.05
LINC00408-201ENST00000447784 GPX1P07203 203 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 SAPCD1Q5SSQ6 148 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 AMTNQ6UX39 209 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 CCDC28AQ8IWP9 274 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 LYPD6BQ8NI32 183 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 Q8TAT8 98 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 TMEM208Q9BTX3 173 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 ZNF492Q9P255 531 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 GOLT1BQ9Y3E0 138 aa8.48□□□□□ -1.05
LINC00408-201ENST00000447784 TRAV8-1A0A0A6YYK1 113 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 TRBV7-9A0A0J9YWB2 115 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 LOC102723971A0A1B0GUV8 181 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 SPRY2O43597 315 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 NMBP08949 121 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 FLI1Q01543 452 aaPredicted RBP8.47□□□□□ -1.05
LINC00408-201ENST00000447784 PRNTQ86SH4 94 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 TMEM75Q8N9X5 138 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 FMC1Q96HJ9 113 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 SGK494Q96LW2 274 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 IGF2BP2-AS1Q96M15 143 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 TREM1Q9NP99 234 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 MED9Q9NWA0 146 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 PSG8Q9UQ74 426 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 TP53TG1Q9Y2A0 90 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 LENEPQ9Y5L5 61 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 NBEAL2Q6ZNJ1 2754 aa8.47□□□□□ -1.05
LINC00408-201ENST00000447784 TRAV12-2A0A075B6T6 113 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 IGHV3OR16-12A0A075B7B8 117 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 TRAV34A0A0B4J273 112 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 RNASE4P34096 147 aaKnown RBP8.46□□□□□ -1.06
LINC00408-201ENST00000447784 PEA15Q15121 130 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 TOR2AQ5JU69 321 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 RNF183Q96D59 192 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 LINC00479Q96M42 142 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 RARRES2Q99969 163 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 NIPSNAP3BQ9BS92 247 aa8.46□□□□□ -1.06
LINC00408-201ENST00000447784 GIG44P09565 113 aaPredicted RBP8.45□□□□□ -1.06
LINC00408-201ENST00000447784 CRISP2P16562 243 aa8.45□□□□□ -1.06
LINC00408-201ENST00000447784 IFITM2Q01629 132 aa8.45□□□□□ -1.06
LINC00408-201ENST00000447784 TMEM183BQ1AE95 376 aa8.45□□□□□ -1.06
LINC00408-201ENST00000447784 ZNF506Q5JVG8 444 aa8.45□□□□□ -1.06
LINC00408-201ENST00000447784 CLLU1Q5K131 121 aa8.45□□□□□ -1.06
LINC00408-201ENST00000447784 FAM210AQ96ND0 272 aa8.45□□□□□ -1.06
LINC00408-201ENST00000447784 LINC01587Q99440 93 aa8.45□□□□□ -1.06
LINC00408-201ENST00000447784 ZFP30Q9Y2G7 519 aa8.45□□□□□ -1.06
LINC00408-201ENST00000447784 TRAV12-3A0A0B4J271 114 aa8.44□□□□□ -1.06
LINC00408-201ENST00000447784 C7orf71A4D174 169 aa8.44□□□□□ -1.06
LINC00408-201ENST00000447784 C3orf84H3BNL1 204 aa8.44□□□□□ -1.06
LINC00408-201ENST00000447784 CEBPGP53567 150 aa8.44□□□□□ -1.06
LINC00408-201ENST00000447784 GFI1BQ5VTD9 330 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms