RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 CYTL1Q9NRR1 136 aa8.91□□□□□ -0.98
SSR4-205ENST00000447375 IGHV3OR16-12A0A075B7B8 117 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 EIF3GO75821 320 aaKnown RBP eCLIP8.9□□□□□ -0.98
SSR4-205ENST00000447375 CT45A10P0DMU9 189 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 CDKN1BP46527 198 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 RANP62826 216 aaKnown RBP8.9□□□□□ -0.98
SSR4-205ENST00000447375 UBE2L3P68036 154 aaKnown RBP8.9□□□□□ -0.98
SSR4-205ENST00000447375 ZNF345Q14585 488 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 FAM122CQ6P4D5 195 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 RAB24Q969Q5 203 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 PHYHIPLQ96FC7 376 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 ST6GAL2Q96JF0 529 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 ODF3Q96PU9 254 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 SCRT2Q9NQ03 307 aa8.9□□□□□ -0.98
SSR4-205ENST00000447375 TRAV12-2A0A075B6T6 113 aa8.89□□□□□ -0.99
SSR4-205ENST00000447375 TMEM189A5PLL7 270 aa8.89□□□□□ -0.99
SSR4-205ENST00000447375 C11orf94C9JXX5 98 aa8.89□□□□□ -0.99
SSR4-205ENST00000447375 INSP01308 110 aa8.89□□□□□ -0.99
SSR4-205ENST00000447375 TSPOP30536 169 aa8.89□□□□□ -0.99
SSR4-205ENST00000447375 BAP18Q8IXM2 172 aa8.89□□□□□ -0.99
SSR4-205ENST00000447375 POM121L12Q8N7R1 296 aa8.89□□□□□ -0.99
SSR4-205ENST00000447375 LINC00477Q96M19 166 aa8.89□□□□□ -0.99
SSR4-205ENST00000447375 ACTR3CQ9C0K3 210 aaPredicted RBP8.89□□□□□ -0.99
SSR4-205ENST00000447375 A0A0D9SG52 128 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 C16orf90A8MZG2 172 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 HMGB3O15347 200 aaKnown RBP8.88□□□□□ -0.99
SSR4-205ENST00000447375 HBE1P02100 147 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 STAG3L2P0CL84 134 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 STAG3L3P0CL85 134 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 CDC34P49427 236 aaPredicted RBP8.88□□□□□ -0.99
SSR4-205ENST00000447375 LGALS9BQ3B8N2 356 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 C9orf47Q6ZRZ4 202 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 SUN5Q8TC36 379 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 ARPC5LQ9BPX5 153 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 TMEM208Q9BTX3 173 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 AGPAT4-IT1Q9H0P7 198 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 Q9H3A6 140 aa8.88□□□□□ -0.99
SSR4-205ENST00000447375 APOBP04114 4563 aaKnown RBP8.88□□□□□ -0.99
SSR4-205ENST00000447375 IGHV4-4A0A075B6R2 117 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 ARL14EPLP0DKL9 152 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 CSN1S1P47710 185 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 ERCC8Q13216 396 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 RRN3P1Q2M238 152 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 TCTE3Q8IZS6 198 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 TMEM256Q8N2U0 113 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 FAM19A4Q96LR4 140 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 VGLL1Q99990 258 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 C20orf144Q9BQM9 153 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 OTORQ9NRC9 128 aa8.87□□□□□ -0.99
SSR4-205ENST00000447375 IGKV2-40A0A087WW87 121 aaPredicted RBP8.86□□□□□ -0.99
SSR4-205ENST00000447375 PGPA6NDG6 321 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 CXorf1O96002 111 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 IGKV2D-40P01614 121 aaPredicted RBP8.86□□□□□ -0.99
SSR4-205ENST00000447375 NMBP08949 121 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 GCHFRP30047 84 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 LEPP41159 167 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 GFI1BQ5VTD9 330 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 ARL6IP6Q8N6S5 226 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 RXFP4Q8TDU9 374 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 LINC01587Q99440 93 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
SSR4-205ENST00000447375 LOC102723971A0A1B0GUV8 181 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 RBAKDNA6NC62 111 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 ZNF705GA8MUZ8 300 aaPredicted RBP8.85□□□□□ -0.99
SSR4-205ENST00000447375 KLLNB2CW77 178 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 DIRC3C9JPN6 131 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 H7BYZ3 331 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 BCL2L11O43521 198 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 PRM2P04554 102 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 SLC25A5P05141 298 aaKnown RBP8.85□□□□□ -0.99
SSR4-205ENST00000447375 SPART-AS1P0CW21 52 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 P0DMU3 169 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 FAM231AP0DMU4 169 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 FAM231CP0DMU5 169 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 CRISP2P16562 243 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 TAS2R60P59551 318 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 ZNF726P1Q15940 193 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 C12orf74Q32Q52 190 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 SOHLH1Q5JUK2 328 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 AKR1C8PQ5T2L2 129 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 TMEM78Q5T7P6 136 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 SSX7Q7RTT5 188 aa8.85□□□□□ -0.99
SSR4-205ENST00000447375 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 CTXND1A0A1B0GTU2 59 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 KANTRA0A1W2PQU2 76 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 SEC11BP0C7V7 166 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 AZU1P20160 251 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 ZNF138P52744 262 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 EMP1P54849 157 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 FAM74A1Q5RGS3 127 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 TMUB2Q71RG4 321 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 HYLS1Q96M11 299 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 TMEM167BQ9NRX6 74 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 DKK2Q9UBU2 259 aa8.84□□□□□ -0.99
SSR4-205ENST00000447375 DNAH5Q8TE73 4624 aa8.84□□□□□ -1
SSR4-205ENST00000447375 TRAV12-3A0A0B4J271 114 aa8.83□□□□□ -1
SSR4-205ENST00000447375 LGALSLQ3ZCW2 172 aaPredicted RBP8.83□□□□□ -1
SSR4-205ENST00000447375 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms