RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TRBV19A0A075B6N1 114 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 K7EM74 188 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 NUP35Q8NFH5 326 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 IGHV1-24A0A0C4DH33 117 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 MYCNOSP40205 109 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 Q6ZR03 302 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 XCL2Q9UBD3 114 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 ARHGAP21Q5T5U3 1957 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 CD300EQ496F6 205 aaPredicted RBP6.83□□□□□ -1.32
PTPN3-204ENST00000446349 SPCS1Q9Y6A9 102 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 LINC00518Q8N0U6 118 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 Q8NFD4 153 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 NPBQ8NG41 125 aa6.83□□□□□ -1.32
PTPN3-204ENST00000446349 LHFPL4Q7Z7J7 247 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 C14orf178Q8N769 122 aaPredicted RBP6.82□□□□□ -1.32
PTPN3-204ENST00000446349 C10orf105Q8TEF2 133 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 TNRC6AQ8NDV7 1962 aaKnown RBP6.82□□□□□ -1.32
PTPN3-204ENST00000446349 CCL18P55774 89 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 ORAOV1Q8WV07 137 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 TM2D2Q9BX73 214 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 PTPRQQ9UMZ3 2332 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 C16orf74Q96GX8 76 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 C15orf65H3BRN8 121 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 SPART-AS1P0CW21 52 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 LAMTOR3Q9UHA4 124 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 FAM208BQ5VWN6 2430 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 IGHV3-53P01767 116 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 PAX9P55771 341 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 Q6ZWC4 215 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 FXYD7P58549 80 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 WFDC1Q9HC57 220 aa6.82□□□□□ -1.32
PTPN3-204ENST00000446349 CTAG1AP78358 180 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 FAM19A2Q8N3H0 131 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 HS3ST6Q96QI5 342 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 GATD1Q8NB37 220 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 PRORYQ9H606 182 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 HERVK_113P63121 156 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 SPINK13Q1W4C9 94 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 DEFB112Q30KQ8 113 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 LHBP01229 141 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 IGLV3-1P01715 115 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 MRPL52Q86TS9 123 aaKnown RBP6.81□□□□□ -1.32
PTPN3-204ENST00000446349 COL4A4P53420 1690 aaPredicted RBP6.81□□□□□ -1.32
PTPN3-204ENST00000446349 CGB3P0DN86 165 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 FAM231DQ6ZW35 169 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 C20orf78Q9BR46 151 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 CRLF1O75462 422 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 C20orf144Q9BQM9 153 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 CENPVL3A0A0U1RRI6 287 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 MED12LQ86YW9 2145 aa6.81□□□□□ -1.32
PTPN3-204ENST00000446349 RNF138Q8WVD3 245 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 NUP210LQ5VU65 1888 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 INS-IGF2F8WCM5 200 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 MRPL23Q16540 153 aaKnown RBP6.8□□□□□ -1.32
PTPN3-204ENST00000446349 C14orf144Q96I85 54 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 IGHV3-73A0A0B4J1V6 119 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 INAFM2P0DMQ5 153 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 LOXL1Q08397 574 aaPredicted RBP6.8□□□□□ -1.32
PTPN3-204ENST00000446349 C22orf46C9J442 243 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 PMVKQ15126 192 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 WFDC12Q8WWY7 111 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 TRAV8-2A0A0B4J237 113 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 K7EMT4 169 aa6.8□□□□□ -1.32
PTPN3-204ENST00000446349 RPL32P62910 135 aaKnown RBP6.79□□□□□ -1.32
PTPN3-204ENST00000446349 Q8N8P6 123 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 VWC2LB2RUY7 222 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 SSBP2P81877 361 aaPredicted RBP6.79□□□□□ -1.32
PTPN3-204ENST00000446349 FAM120AOSQ5T036 256 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 FSTL3O95633 263 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 Q8TAT8 98 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 TRAV13-1A0A0B4J241 112 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 A0A1B0GV90 55 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 G3V318 75 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 UBE2CO00762 179 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 GP9P14770 177 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 PRR25Q96S07 402 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 CLPSL1A2RUU4 121 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 LINC01545Q5VT33 79 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 SNHG12Q9BXW3 62 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 ICOSQ9Y6W8 199 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 FREM1Q5H8C1 2179 aa6.79□□□□□ -1.32
PTPN3-204ENST00000446349 IGHV4-39P01824 125 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GFI1BQ5VTD9 330 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 NCOA6Q14686 2063 aaPredicted RBP6.78□□□□□ -1.32
PTPN3-204ENST00000446349 DKK1O94907 266 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 FHL1Q13642 323 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE12BA1L429 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE7O76087 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE12FP0CL80 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE12GP0CL81 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE12IP0CL82 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 CGB7P0DN87 165 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 TRAV13-2A0A0B4J235 113 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 DAZ2Q13117 558 aaKnown RBP6.78□□□□□ -1.32
PTPN3-204ENST00000446349 DAZ4Q86SG3 579 aaKnown RBP6.78□□□□□ -1.32
PTPN3-204ENST00000446349 DAZ3Q9NR90 486 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms