RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 KPNA4O00629 521 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 ARPC5O15511 151 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 DHFRP00374 187 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 CTSGP08311 255 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 INSL3P51460 131 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 SMCO1Q147U7 214 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 SIGLECL1Q8N7X8 197 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 CANT1Q8WVQ1 401 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 CCDC115Q96NT0 180 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 HSPB9Q9BQS6 159 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 DOHHQ9BU89 302 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 RTL8AQ9BWD3 113 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 NUBP2Q9Y5Y2 271 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 CDK5RAP2Q96SN8 1893 aa2.34□□□□□ -2.03
HMGB1P48-201ENST00000446155 ZNF236Q9UL36 1845 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 STAB1Q9NY15 2570 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 COL6A6A6NMZ7 2263 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 IGHV3-64A0A075B6Q5 118 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 IGHV1-18A0A0C4DH31 117 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 TRBV10-2A0A0K0K1G8 114 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 A0A1W2PNN7 141 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 GGCTO75223 188 aaKnown RBP2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 TCL1BO95988 128 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 FAM107AO95990 144 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 TRGC2P03986 189 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 HMGN1P05114 100 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 OR10J4P0C629 311 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 CSRP1P21291 193 aaKnown RBP2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 FXYD2P54710 66 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 FAM27BQ5VT28 67 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 CROCCP2Q86T23 111 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 TEX37Q96LM6 180 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 CARD19Q96LW7 228 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 HIST1H2BLQ99880 126 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 ANKHD1Q8IWZ3 2542 aaKnown RBP2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 A0A1B0GUL6 1792 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 SHANK1Q9Y566 2161 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 SIP14410 1827 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 DOCK1Q14185 1865 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 CSMD1Q96PZ7 3565 aa2.33□□□□□ -2.04
HMGB1P48-201ENST00000446155 GREB1Q4ZG55 1949 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 SPTBN1Q01082 2364 aaKnown RBP2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 FANCMQ8IYD8 2048 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 IGKV2-24A0A0C4DH68 120 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 TLCD2A6NGC4 264 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 ARL5CA6NH57 179 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 OR2T1O43869 369 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 RPL7P18124 248 aaKnown RBP2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 RNASE4P34096 147 aaKnown RBP2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 UBE2BP63146 152 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 RTL8BQ17RB0 113 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 KHDC3LQ587J8 217 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 DPPA3Q6W0C5 159 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 ANGPTL5Q86XS5 388 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 OR5A1Q8NGJ0 315 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 ISOC1Q96CN7 298 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 MRPS24Q96EL2 167 aaKnown RBP2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 YPEL2Q96QA6 119 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 C6orf62Q9GZU0 229 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 EPDR1Q9UM22 224 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 LAMTOR2Q9Y2Q5 125 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 F8P00451 2351 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 TACC2O95359 2948 aa2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 SPENQ96T58 3664 aaKnown RBP2.32□□□□□ -2.04
HMGB1P48-201ENST00000446155 PKD1L1Q8TDX9 2849 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 HEATR5AQ86XA9 2040 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 A0A0D9SG52 128 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 TMEM256-PLSCR3K7ERE1 68 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 IGLV3-19P01714 112 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 POLR2HP52434 150 aaKnown RBP2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 GTF2A1P52655 376 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 RPS28P62857 69 aaKnown RBP2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 ZNF90Q03938 601 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 PPTC7Q8NI37 304 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 MRPL32Q9BYC8 188 aaKnown RBP2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 JPT1Q9UK76 154 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 COL1A2P08123 1366 aa2.31□□□□□ -2.04
HMGB1P48-201ENST00000446155 DENND4CQ5VZ89 1909 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 DOCK4Q8N1I0 1966 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 F5P12259 2224 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 NBASA2RRP1 2371 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 FN1P02751 2386 aaKnown RBP2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 NOTCH1P46531 2555 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 MAP1AP78559 2803 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 TRGV10A0A0A0MS01 117 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 MUC21A0A0G2JKD1 596 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 MUC21A0A140T8X8 626 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 A0A1B0GVG6 124 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 SPAARA0A1B0GVQ0 90 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 TRDV1A0A1B0GX56 115 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 MEIS3P1A6NDR6 274 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 RFPL4AA6NLU0 287 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 RFPL4AL1F8VTS6 287 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 GADD45GO95257 159 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 HTR1AP08908 422 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms