RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PRB4P10163 310 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-208ENST00000444533 FHITP49789 147 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 SULT1A2P50226 295 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 ZNF138P52744 262 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-208ENST00000444533 SUMO1P63165 101 aaKnown RBP10.27□□□□□ -0.77
SSBP3-208ENST00000444533 ERCC8Q13216 396 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 SSX7Q7RTT5 188 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 MBD3L1Q8WWY6 194 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 NDFIP1Q9BT67 221 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 TRAV12-2A0A075B6T6 113 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 TMEM189A5PLL7 270 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 ZNF705EA8MWA4 302 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-208ENST00000444533 GPX1P07203 203 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 UBE2G2P60604 165 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 CST9LP1Q5W188 147 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 GOLT1AQ6ZVE7 132 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 LINC01587Q99440 93 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 NIPSNAP3BQ9BS92 247 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 AGPAT4-IT1Q9H0P7 198 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 ARL2-SNX15V9GYD0 113 aa10.26□□□□□ -0.77
SSBP3-208ENST00000444533 TRBV7-9A0A0J9YWB2 115 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 A0A0J9YWU9 116 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 A0A1B0GV50 99 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 FBLL1A6NHQ2 334 aaKnown RBP10.25□□□□□ -0.77
SSBP3-208ENST00000444533 J3KRW8 73 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 NMBP08949 121 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 CT45A10P0DMU9 189 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 RRN3P1Q2M238 152 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 NEU1Q99519 415 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 VGLL1Q99990 258 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 TCEAL7Q9BRU2 100 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 C11orf68Q9H3H3 251 aaKnown RBP10.25□□□□□ -0.77
SSBP3-208ENST00000444533 TMPRSS5Q9H3S3 457 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 ZNF492Q9P255 531 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 EPDR1Q9UM22 224 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 LENEPQ9Y5L5 61 aa10.25□□□□□ -0.77
SSBP3-208ENST00000444533 H7BYZ3 331 aa10.24□□□□□ -0.77
SSBP3-208ENST00000444533 IFNA1P01562 189 aa10.24□□□□□ -0.77
SSBP3-208ENST00000444533 ZNF705AQ6ZN79 300 aaPredicted RBP10.24□□□□□ -0.77
SSBP3-208ENST00000444533 CCDC28AQ8IWP9 274 aa10.24□□□□□ -0.77
SSBP3-208ENST00000444533 CYB561D1Q8N8Q1 229 aa10.24□□□□□ -0.77
SSBP3-208ENST00000444533 HIST1H2BAQ96A08 127 aa10.24□□□□□ -0.77
SSBP3-208ENST00000444533 ATG101Q9BSB4 218 aa10.24□□□□□ -0.77
SSBP3-208ENST00000444533 NBEAL2Q6ZNJ1 2754 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 IGHV4-28A0A0C4DH34 117 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 C7orf71A4D174 169 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 FAM74A7A6NL05 159 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 GGTLC3B5MD39 225 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 TCRAP04437 139 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 HTN1P15515 57 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 GNG5P63218 68 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 BLOC1S1P78537 153 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 ALKAL2Q6UX46 152 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 MANBALQ9NQG1 85 aa10.23□□□□□ -0.77
SSBP3-208ENST00000444533 TRAV1-1A0A0B4J248 108 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 TEX48A0A1B0GUV7 120 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-208ENST00000444533 PAGE4O60829 102 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 CRISP2P16562 243 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 RNASE4P34096 147 aaKnown RBP10.22□□□□□ -0.77
SSBP3-208ENST00000444533 TAS2R60P59551 318 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 GFI1BQ5VTD9 330 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 Q8TAT8 98 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 MUC7Q8TAX7 377 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 EDA2RQ9HAV5 297 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 PLA2G2EQ9NZK7 142 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 YTHDF2Q9Y5A9 579 aaKnown RBP10.22□□□□□ -0.77
SSBP3-208ENST00000444533 X6R8D5 127 aa10.22□□□□□ -0.77
SSBP3-208ENST00000444533 COL7A1Q02388 2944 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 TRAV12-3A0A0B4J271 114 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 LOC102723971A0A1B0GUV8 181 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 PEX7O00628 323 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 UBE2G1P62253 170 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 TMEM75Q8N9X5 138 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 Q8NAQ8 132 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 C11orf45Q8TAV5 145 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 PYGO2Q9BRQ0 406 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 TREM1Q9NP99 234 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 GNG13Q9P2W3 67 aa10.21□□□□□ -0.77
SSBP3-208ENST00000444533 KLLNB2CW77 178 aa10.2□□□□□ -0.78
SSBP3-208ENST00000444533 C3orf84H3BNL1 204 aa10.2□□□□□ -0.78
SSBP3-208ENST00000444533 RGS13O14921 159 aa10.2□□□□□ -0.78
SSBP3-208ENST00000444533 DEFB4AO15263 64 aa10.2□□□□□ -0.78
SSBP3-208ENST00000444533 TAGLN2P37802 199 aaKnown RBP10.2□□□□□ -0.78
SSBP3-208ENST00000444533 EMP1P54849 157 aa10.2□□□□□ -0.78
SSBP3-208ENST00000444533 FLI1Q01543 452 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-208ENST00000444533 SAPCD1Q5SSQ6 148 aa10.2□□□□□ -0.78
SSBP3-208ENST00000444533 C16orf74Q96GX8 76 aa10.2□□□□□ -0.78
SSBP3-208ENST00000444533 TXNDC17Q9BRA2 123 aa10.2□□□□□ -0.78
SSBP3-208ENST00000444533 CXorf65A6NEN9 183 aa10.19□□□□□ -0.78
SSBP3-208ENST00000444533 ZNF705GA8MUZ8 300 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-208ENST00000444533 C11orf94C9JXX5 98 aa10.19□□□□□ -0.78
SSBP3-208ENST00000444533 SPART-AS1P0CW21 52 aa10.19□□□□□ -0.78
SSBP3-208ENST00000444533 AKR1C3P42330 323 aa10.19□□□□□ -0.78
SSBP3-208ENST00000444533 ZNF493Q6ZR52 646 aa10.19□□□□□ -0.78
SSBP3-208ENST00000444533 PRNTQ86SH4 94 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms