RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 CBLN1P23435 193 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 RPL30P62888 115 aaKnown RBP2.74□□□□□ -1.97
UBR3-206ENST00000444475 BVES-AS1Q5T3Y7 98 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 ZNF660Q6AZW8 331 aaPredicted RBP2.74□□□□□ -1.97
UBR3-206ENST00000444475 C2orf66Q6UXQ4 117 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 ORMDL3Q8N138 153 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 DAND5Q8N907 189 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 CSAG2Q9Y5P2 127 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 LEPROTO15243 131 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 CMC4P56277 68 aaPredicted RBP2.74□□□□□ -1.97
UBR3-206ENST00000444475 LINC00310P59036 64 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 CELA1Q9UNI1 258 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 SOCS3O14543 225 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 PROSCO94903 275 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 SLC25A14O95258 325 aaPredicted RBP2.74□□□□□ -1.97
UBR3-206ENST00000444475 GYPAP02724 150 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 CD28P10747 220 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 COX6A1P12074 109 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 POLR2JP52435 117 aaKnown RBP2.74□□□□□ -1.97
UBR3-206ENST00000444475 MRPL51Q4U2R6 128 aaKnown RBP2.74□□□□□ -1.97
UBR3-206ENST00000444475 VSTM2AQ8TAG5 236 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 ST20Q9HBF5 79 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 SLC39A9Q9NUM3 307 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 UTRNP46939 3433 aa2.74□□□□□ -1.97
UBR3-206ENST00000444475 POLEQ07864 2286 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 DDX60LQ5H9U9 1706 aaKnown RBP2.73□□□□□ -1.97
UBR3-206ENST00000444475 IGLV3-12A0A075B6K2 115 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 A0A0J9YXY3 114 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 TSPEAR-AS2P59090 65 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 TIFABQ6ZNK6 161 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 CLDND2Q8NHS1 167 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 TRAV19A0A0A6YYK7 116 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 IBA57-AS1B1ANH7 110 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 GNB1P62873 340 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 RPL18Q07020 188 aaKnown RBP2.73□□□□□ -1.97
UBR3-206ENST00000444475 ZFP2Q6ZN57 461 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 RMI2Q96E14 147 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 LINC01600Q96MT4 127 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 VGLL1Q99990 258 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 NPCDR1Q9BY65 106 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 CYSTM1Q9H1C7 97 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 C3orf84H3BNL1 204 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 K7EM74 188 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 NPPCP23582 126 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 HINT1P49773 126 aaPredicted RBP2.73□□□□□ -1.97
UBR3-206ENST00000444475 TWIST1Q15672 202 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 MPV17L2Q567V2 206 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 CGB2Q6NT52 195 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 CAMK2N2Q96S95 79 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
UBR3-206ENST00000444475 M0R233 179 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 NPC2P61916 151 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 LPAL2Q16609 132 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 SMIM29Q86T20 159 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 Q8N8P6 123 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 GTSF1Q8WW33 167 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 COPS9Q8WXC6 57 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 CHCHD5Q9BSY4 110 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 CACFD1Q9UGQ2 172 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 NUPR1O60356 82 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 S100A4P26447 101 aaKnown RBP2.72□□□□□ -1.97
UBR3-206ENST00000444475 COL4A4P53420 1690 aaPredicted RBP2.72□□□□□ -1.97
UBR3-206ENST00000444475 HMGN3Q15651 99 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 TMEM204Q9BSN7 226 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 KRTAP3-1Q9BYR8 98 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 ZNF581Q9P0T4 197 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 CCDC88CQ9P219 2028 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 LRRC37AA6NMS7 1700 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 IGLV1-50A0A075B6I6 118 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 A0A1W2PPM0 123 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 A8MWL6 223 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 GABARAPO95166 117 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 SEC11AP67812 179 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 ASB16-AS1Q495Z4 193 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 Q8NDZ9 215 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 S100A16Q96FQ6 103 aaKnown RBP2.72□□□□□ -1.97
UBR3-206ENST00000444475 PLA2G12AQ9BZM1 189 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 CXCL16Q9H2A7 254 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 XAGE1AQ9HD64 81 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 SCN1AP35498 2009 aa2.72□□□□□ -1.97
UBR3-206ENST00000444475 ZFC3H1O60293 1989 aaKnown RBP2.72□□□□□ -1.97
UBR3-206ENST00000444475 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 IGLV2-14P01704 120 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 HLA-DQA1P01909 254 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 TPT1P13693 172 aaKnown RBP2.71□□□□□ -1.98
UBR3-206ENST00000444475 SSR2P43308 183 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 C2orf83Q53S99 150 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 OR5AS1Q8N127 324 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 Q8NBF4 154 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 PHLDA3Q9Y5J5 127 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 MGAMO43451 1857 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 A0A087WXM4 84 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 PATE4P0C8F1 98 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 IL17AQ16552 155 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 C9orf57Q5W0N0 161 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 C19orf48Q6RUI8 117 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 ATP11AUNQ6ZP68 121 aa2.71□□□□□ -1.98
UBR3-206ENST00000444475 RPP21Q9H633 154 aaKnown RBP2.71□□□□□ -1.98
UBR3-206ENST00000444475 SCRT2Q9NQ03 307 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms