RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 TMEM86BQ8N661 226 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 EEF1AKMT3Q96AZ1 226 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 TRBV19A0A075B6N1 114 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 LGALS9O00182 355 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 NTN3O00634 580 aaPredicted RBP4.11□□□□□ -1.75
SCN11A-202ENST00000444237 PSPNO60542 156 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 MRPL14Q6P1L8 145 aaKnown RBP4.11□□□□□ -1.75
SCN11A-202ENST00000444237 HRCT1Q6UXD1 115 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 DTX2Q86UW9 622 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 SAP25Q8TEE9 199 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 PLXNA3P51805 1871 aa4.11□□□□□ -1.75
SCN11A-202ENST00000444237 IGHV1-69DA0A0B4J2H0 117 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 LINC01619G3V211 115 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 ODF3L1Q8IXM7 274 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 LINC00526Q96FQ7 95 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 MYOD1P15172 320 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 CACNA1IQ9P0X4 2223 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 CABIN1Q9Y6J0 2220 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 IGKV3-7A0A075B6H7 116 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 IGHV1-45A0A0A0MS14 117 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 A0A0U1RQV1 116 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 CLPSP04118 112 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 PSMB8P28062 276 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 CXCL5P42830 114 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 SEC61GP60059 68 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 SPINK14Q6IE38 97 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 TRPT1Q86TN4 253 aaKnown RBP4.1□□□□□ -1.75
SCN11A-202ENST00000444237 THAP8Q8NA92 274 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 ZNF503Q96F45 646 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 NDUFA12Q9UI09 145 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 ATG2BQ96BY7 2078 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 OVOL1O14753 267 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 HTN1P15515 57 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 RNASE4P34096 147 aaKnown RBP4.1□□□□□ -1.75
SCN11A-202ENST00000444237 SLC25A45Q8N413 288 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 Q8TAT8 98 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 ZNF625Q96I27 306 aaPredicted RBP4.1□□□□□ -1.75
SCN11A-202ENST00000444237 VSIG2Q96IQ7 327 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 C8orf49Q96NF6 230 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 TRIOBPQ9H2D6 2365 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 K7EM74 188 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 P0DMU3 169 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 FAM231AP0DMU4 169 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 FAM231CP0DMU5 169 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
SCN11A-202ENST00000444237 ASPHD1Q5U4P2 390 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 C11orf44Q8N8P7 122 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 PHLDA1Q8WV24 401 aaPredicted RBP4.1□□□□□ -1.75
SCN11A-202ENST00000444237 IGFBPL1Q8WX77 278 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 DDB2Q92466 427 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 SIGLEC9Q9Y336 463 aa4.1□□□□□ -1.75
SCN11A-202ENST00000444237 URB1O60287 2271 aaKnown RBP4.09□□□□□ -1.75
SCN11A-202ENST00000444237 TRAV13-2A0A0B4J235 113 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 EFNA2O43921 213 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 C3orf36Q3SXR2 165 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 GDF5OSQ5U4N7 250 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 C14orf178Q8N769 122 aaPredicted RBP4.09□□□□□ -1.75
SCN11A-202ENST00000444237 MBD6Q96DN6 1003 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 PRR25Q96S07 402 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 A0A0U1RRA0 63 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 TEX49A0A1B0GTD5 131 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 MLANAQ16655 118 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 GFRALQ6UXV0 394 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 TTTY12Q9BZ98 90 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 U3KQE9 123 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 COL4A4P53420 1690 aaPredicted RBP4.09□□□□□ -1.75
SCN11A-202ENST00000444237 RS1O15537 224 aa4.09□□□□□ -1.75
SCN11A-202ENST00000444237 IGKV3D-15A0A087WSY6 115 aa4.09□□□□□ -1.76
SCN11A-202ENST00000444237 IGKV3D-7A0A0C4DH55 119 aa4.09□□□□□ -1.76
SCN11A-202ENST00000444237 TINCRA0A1B0GVN0 87 aa4.09□□□□□ -1.76
SCN11A-202ENST00000444237 M0R1W7 72 aa4.09□□□□□ -1.76
SCN11A-202ENST00000444237 IGKV3-15P01624 115 aa4.09□□□□□ -1.76
SCN11A-202ENST00000444237 ZFP2Q6ZN57 461 aa4.09□□□□□ -1.76
SCN11A-202ENST00000444237 MUSTN1Q8IVN3 82 aa4.09□□□□□ -1.76
SCN11A-202ENST00000444237 TOMM7Q9P0U1 55 aa4.09□□□□□ -1.76
SCN11A-202ENST00000444237 OOSP1A8MZH6 123 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 F6UB75 175 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 IGLV2-8P01709 118 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 C10orf55Q5SWW7 151 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 Q6ZSR3 168 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 IGKV3D-20A0A0C4DH25 116 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 RBAKDNA6NC62 111 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 C19orf71A6NCJ1 209 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 PRRG2O14669 202 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 PFN2P35080 140 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 LINC00158P58513 81 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 NDUFA4L2Q9NRX3 87 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 VWA8A3KMH1 1905 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 TICRRQ7Z2Z1 1910 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 ALPK3Q96L96 1907 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 TRBV6-1A0A0K0K1D8 114 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 PRIMA1Q86XR5 153 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 RP1P56715 2156 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 TRAV17A0A0B4J275 112 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 MALP21145 153 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 GATA3P23771 443 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 LINC00205P59089 165 aa4.08□□□□□ -1.76
SCN11A-202ENST00000444237 C10orf105Q8TEF2 133 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms