RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 NKX6-2Q9C056 277 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-203ENST00000444172 U3KQK5 164 aa13.06□□□□□ -0.32
CIRBP-203ENST00000444172 IGHV3OR16-12A0A075B7B8 117 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 AMBPP02760 352 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 TSPOP30536 169 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 LEPP41159 167 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 CDKN1BP46527 198 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 PPT1P50897 306 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 C9orf47Q6ZRZ4 202 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 RARRES2Q99969 163 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 GNG13Q9P2W3 67 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 EPDR1Q9UM22 224 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 TP53TG1Q9Y2A0 90 aa13.05□□□□□ -0.32
CIRBP-203ENST00000444172 TRAV1-1A0A0B4J248 108 aa13.04□□□□□ -0.32
CIRBP-203ENST00000444172 TCRAP04437 139 aa13.04□□□□□ -0.32
CIRBP-203ENST00000444172 TEX261Q6UWH6 196 aa13.04□□□□□ -0.32
CIRBP-203ENST00000444172 ARL6IP6Q8N6S5 226 aa13.04□□□□□ -0.32
CIRBP-203ENST00000444172 CSNK1G2-AS1Q8NCQ2 148 aa13.04□□□□□ -0.32
CIRBP-203ENST00000444172 OR11H2Q8NH07 326 aa13.04□□□□□ -0.32
CIRBP-203ENST00000444172 SGK494Q96LW2 274 aa13.04□□□□□ -0.32
CIRBP-203ENST00000444172 K7EQM0 130 aa13.03□□□□□ -0.32
CIRBP-203ENST00000444172 ATP5G3P48201 142 aa13.03□□□□□ -0.32
CIRBP-203ENST00000444172 ZNF138P52744 262 aa13.03□□□□□ -0.32
CIRBP-203ENST00000444172 Q8TAT8 98 aa13.03□□□□□ -0.32
CIRBP-203ENST00000444172 IGF2BP2-AS1Q96M15 143 aa13.03□□□□□ -0.32
CIRBP-203ENST00000444172 ZNF492Q9P255 531 aa13.03□□□□□ -0.32
CIRBP-203ENST00000444172 CRXO43186 299 aaPredicted RBP13.02□□□□□ -0.33
CIRBP-203ENST00000444172 INSP01308 110 aa13.02□□□□□ -0.33
CIRBP-203ENST00000444172 KIR3DS1Q14943 382 aa13.02□□□□□ -0.33
CIRBP-203ENST00000444172 ODF3Q96PU9 254 aa13.02□□□□□ -0.33
CIRBP-203ENST00000444172 TMEM208Q9BTX3 173 aa13.02□□□□□ -0.33
CIRBP-203ENST00000444172 GOLT1BQ9Y3E0 138 aa13.02□□□□□ -0.33
CIRBP-203ENST00000444172 ARL2-SNX15V9GYD0 113 aa13.02□□□□□ -0.33
CIRBP-203ENST00000444172 DNAH9Q9NYC9 4486 aa13.02□□□□□ -0.33
CIRBP-203ENST00000444172 TRAV8-1A0A0A6YYK1 113 aa13.01□□□□□ -0.33
CIRBP-203ENST00000444172 SERTM2A0A1B0GWG4 89 aa13.01□□□□□ -0.33
CIRBP-203ENST00000444172 F6UZH7 168 aa13.01□□□□□ -0.33
CIRBP-203ENST00000444172 PEX7O00628 323 aa13.01□□□□□ -0.33
CIRBP-203ENST00000444172 IFNA1P01562 189 aa13.01□□□□□ -0.33
CIRBP-203ENST00000444172 CYB561D1Q8N8Q1 229 aa13.01□□□□□ -0.33
CIRBP-203ENST00000444172 ATG101Q9BSB4 218 aa13.01□□□□□ -0.33
CIRBP-203ENST00000444172 MANBALQ9NQG1 85 aa13.01□□□□□ -0.33
CIRBP-203ENST00000444172 C11orf94C9JXX5 98 aa13□□□□□ -0.33
CIRBP-203ENST00000444172 GPX1P07203 203 aa13□□□□□ -0.33
CIRBP-203ENST00000444172 CCDC28AQ8IWP9 274 aa13□□□□□ -0.33
CIRBP-203ENST00000444172 C1orf158Q8N1D5 194 aa13□□□□□ -0.33
CIRBP-203ENST00000444172 ZNF680Q8NEM1 530 aa13□□□□□ -0.33
CIRBP-203ENST00000444172 FAM19A4Q96LR4 140 aa13□□□□□ -0.33
CIRBP-203ENST00000444172 RNASE4P34096 147 aaKnown RBP12.99□□□□□ -0.33
CIRBP-203ENST00000444172 GFI1BQ5VTD9 330 aa12.99□□□□□ -0.33
CIRBP-203ENST00000444172 HIST1H2BAQ96A08 127 aa12.99□□□□□ -0.33
CIRBP-203ENST00000444172 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
CIRBP-203ENST00000444172 LINC01587Q99440 93 aa12.99□□□□□ -0.33
CIRBP-203ENST00000444172 PSG8Q9UQ74 426 aa12.99□□□□□ -0.33
CIRBP-203ENST00000444172 TRAV12-3A0A0B4J271 114 aa12.98□□□□□ -0.33
CIRBP-203ENST00000444172 TRAV34A0A0B4J273 112 aa12.98□□□□□ -0.33
CIRBP-203ENST00000444172 HTN1P15515 57 aa12.98□□□□□ -0.33
CIRBP-203ENST00000444172 CRISP2P16562 243 aa12.98□□□□□ -0.33
CIRBP-203ENST00000444172 BTN1A1Q13410 526 aa12.98□□□□□ -0.33
CIRBP-203ENST00000444172 ZNF705AQ6ZN79 300 aaPredicted RBP12.98□□□□□ -0.33
CIRBP-203ENST00000444172 PRNTQ86SH4 94 aa12.98□□□□□ -0.33
CIRBP-203ENST00000444172 TMEM75Q8N9X5 138 aa12.98□□□□□ -0.33
CIRBP-203ENST00000444172 PCNPQ8WW12 178 aaKnown RBP12.98□□□□□ -0.33
CIRBP-203ENST00000444172 X6R8D5 127 aa12.98□□□□□ -0.33
CIRBP-203ENST00000444172 C7orf71A4D174 169 aa12.97□□□□□ -0.33
CIRBP-203ENST00000444172 RBMY1A1P0DJD3 496 aaKnown RBP12.97□□□□□ -0.33
CIRBP-203ENST00000444172 RBMY1CP0DJD4 496 aa12.97□□□□□ -0.33
CIRBP-203ENST00000444172 FLI1Q01543 452 aaPredicted RBP12.97□□□□□ -0.33
CIRBP-203ENST00000444172 RBMY1FQ15415 496 aaKnown RBP12.97□□□□□ -0.33
CIRBP-203ENST00000444172 ZFAND2AQ8N6M9 145 aa12.97□□□□□ -0.33
CIRBP-203ENST00000444172 TCEAL7Q9BRU2 100 aa12.97□□□□□ -0.33
CIRBP-203ENST00000444172 NDFIP1Q9BT67 221 aa12.97□□□□□ -0.33
CIRBP-203ENST00000444172 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
CIRBP-203ENST00000444172 LENEPQ9Y5L5 61 aa12.97□□□□□ -0.33
CIRBP-203ENST00000444172 HUWE1Q7Z6Z7 4374 aaKnown RBP12.96□□□□□ -0.33
CIRBP-203ENST00000444172 TRBV7-9A0A0J9YWB2 115 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 A0A0J9YWU9 116 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 SCO2A0A1W2PP80 73 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 ZNF705GA8MUZ8 300 aaPredicted RBP12.96□□□□□ -0.33
CIRBP-203ENST00000444172 KLLNB2CW77 178 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 DEFB4AO15263 64 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 IGLV2-11P01706 119 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 NMBP08949 121 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 MIFP14174 115 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 AKR1C3P42330 323 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 UBE2G1P62253 170 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 TMEM256Q8N2U0 113 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 LYPD6BQ8NI32 183 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 NIPSNAP3BQ9BS92 247 aa12.96□□□□□ -0.33
CIRBP-203ENST00000444172 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 FBLL1A6NHQ2 334 aaKnown RBP12.95□□□□□ -0.34
CIRBP-203ENST00000444172 PRM2P04554 102 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 BCL2P10415 239 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 PRR9Q5T870 116 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 TVP23CQ96ET8 276 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 NEU1Q99519 415 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 TXNDC17Q9BRA2 123 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 VAX2Q9UIW0 290 aa12.95□□□□□ -0.34
CIRBP-203ENST00000444172 IGHV4-28A0A0C4DH34 117 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms