RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MEIG1Q5JSS6 88 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 FAM216BQ8N7L0 139 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 MAPKAPK5-AS1Q8N8E1 139 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 PTH2Q96A98 100 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 DOPEY1Q5JWR5 2465 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 PRTN3P24158 256 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 XGP55808 180 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 UTF1Q5T230 341 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 PRO0461Q9UI25 63 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 INS-IGF2F8WCM5 200 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 IGHV4-39P01824 125 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 LY6G6EA0A0G2JKS1 128 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 HLA-DRB4P13762 266 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 ATXN8Q156A1 80 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 TMEM167AQ8TBQ9 72 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 U3KQA8 63 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 HLA-DRB4X5D2U9 266 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 TGFAP01135 160 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 HLA-DMBP28068 263 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 SPANXN1Q5VSR9 72 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 C17orf58Q2M2W7 97 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 SRSF8Q9BRL6 282 aaKnown RBP3.98□□□□□ -1.77
HERC1-201ENST00000443617 RAB1BQ9H0U4 201 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 ZNF56Q15929 161 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 ONECUT1Q9UBC0 465 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 ATG2AQ2TAZ0 1938 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 ZNF833PQ6ZTB9 187 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 PRRG2O14669 202 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 LGALS3P17931 250 aaKnown RBP3.98□□□□□ -1.77
HERC1-201ENST00000443617 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 C1orf229Q6ZS94 237 aaPredicted RBP3.98□□□□□ -1.77
HERC1-201ENST00000443617 FAM110AQ9BQ89 295 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 FCN3O75636 299 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 HES1Q14469 280 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 ZMAT4Q9H898 229 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 LINC01549A6NIU2 74 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 PPP1R17O96001 155 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 KIR2DL4Q99706 377 aa3.98□□□□□ -1.77
HERC1-201ENST00000443617 C10orf142B7Z368 130 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 SLC25A16P16260 332 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 GATA4P43694 442 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 HHLA3Q9XRX5 114 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 ABCA2Q9BZC7 2435 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 LINC00574Q9H8X3 128 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 FSTL3O95633 263 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 PDE6HQ13956 83 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 NFE4Q86UQ8 179 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 RNF125Q96EQ8 232 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 NDUFB3O43676 98 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 CRYGCP07315 174 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 LGALS1P09382 135 aaKnown RBP3.97□□□□□ -1.77
HERC1-201ENST00000443617 TMEM155Q4W5P6 130 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 CCL17Q92583 94 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 COL4A6Q14031 1691 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 KIAA1549LQ6ZVL6 1849 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 A0A1W2PPI3 338 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 OR11H6Q8NGC7 330 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 PRSS2P07478 247 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 RPL32P62910 135 aaKnown RBP3.97□□□□□ -1.77
HERC1-201ENST00000443617 ZNRD1Q9P1U0 126 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 CR1LQ2VPA4 569 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 PRADC1Q9BSG0 188 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 NAV2Q8IVL1 2488 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 PVRIGQ6DKI7 326 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 ZFP2Q6ZN57 461 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 DTX2Q86UW9 622 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 TMEM126AQ9H061 195 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 MRPL36Q9P0J6 103 aaKnown RBP3.97□□□□□ -1.77
HERC1-201ENST00000443617 CGB3P0DN86 165 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 CGB7P0DN87 165 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 SIGLEC15Q6ZMC9 328 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 OR10J6PQ8NGY7 276 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 IGF2RP11717 2491 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 GATA1P15976 413 aaPredicted RBP3.97□□□□□ -1.77
HERC1-201ENST00000443617 C15orf53Q8NAA6 179 aa3.97□□□□□ -1.77
HERC1-201ENST00000443617 C1orf162Q8NEQ5 155 aaPredicted RBP3.97□□□□□ -1.77
HERC1-201ENST00000443617 F5H697 171 aa3.96□□□□□ -1.77
HERC1-201ENST00000443617 PAPPA-AS1Q5QFB9 102 aa3.96□□□□□ -1.77
HERC1-201ENST00000443617 CFAP126Q5VTH2 177 aa3.96□□□□□ -1.77
HERC1-201ENST00000443617 IGKV1-17P01599 117 aa3.96□□□□□ -1.77
HERC1-201ENST00000443617 C2orf82Q6UX34 121 aa3.96□□□□□ -1.77
HERC1-201ENST00000443617 COX7A1P24310 79 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 PIFOQ8TCI5 191 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 NUP210LQ5VU65 1888 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 S100A4P26447 101 aaKnown RBP3.96□□□□□ -1.78
HERC1-201ENST00000443617 DLX1P56177 255 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 TMEM200BQ69YZ2 307 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 Q8TAT8 98 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 ANKRD29Q8N6D5 301 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 PRO1854Q9UHT4 67 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 TET2Q6N021 2002 aaPredicted RBP3.96□□□□□ -1.78
HERC1-201ENST00000443617 C9JAW5 83 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 K7EM74 188 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 RHODO00212 210 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 LHBP01229 141 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 COX6CP09669 75 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 MFAP4P55083 255 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 GAFA1Q96PS6 74 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 DLX6P56179 175 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms