RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 RUSC1-AS1Q66K80 236 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 Q6ZQT7 251 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 TEN1Q86WV5 123 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 RABAC1Q9UI14 185 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 EP300Q09472 2414 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-206ENST00000441438 TRAV8-1A0A0A6YYK1 113 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 SPTY2D1-AS1A0A0U1RR47 76 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 PATE3B3GLJ2 98 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 ZNF73O43830 326 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-206ENST00000441438 DRAM1Q8N682 238 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 SRXN1Q9BYN0 137 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 LINC00527Q9UJ94 153 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 BOD1L1Q8NFC6 3051 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 HCFC1P51610 2035 aa8.07□□□□□ -1.12
SYNE2-206ENST00000441438 DSPP15924 2871 aaKnown RBP8.07□□□□□ -1.12
SYNE2-206ENST00000441438 FOXL2NBQ6ZUU3 175 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 C18orf12Q96KH6 178 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 RP1L1Q8IWN7 2480 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-206ENST00000441438 ZNF253O75346 499 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 HLA-DMBP28068 263 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 ZNF117Q03924 483 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 CFAP47Q6ZTR5 3102 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 C17orf112F2Z3M2 114 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 FCGR2CP31995 323 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 MARCH3Q86UD3 253 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 TMEM256Q8N2U0 113 aa8.06□□□□□ -1.12
SYNE2-206ENST00000441438 EIF5A2Q9GZV4 153 aaKnown RBP8.06□□□□□ -1.12
SYNE2-206ENST00000441438 ERVK-16P61578 105 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 LGALS9CQ6DKI2 356 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 POLEQ07864 2286 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 ZFHX4Q86UP3 3567 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 DPRXA6NFQ7 191 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 TMEM14DPA8MWL7 114 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 SDCBPO00560 298 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-206ENST00000441438 PRR3P79522 188 aaKnown RBP8.05□□□□□ -1.12
SYNE2-206ENST00000441438 RPL18Q07020 188 aaKnown RBP8.05□□□□□ -1.12
SYNE2-206ENST00000441438 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
SYNE2-206ENST00000441438 SP5Q6BEB4 398 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-206ENST00000441438 FP248Q71RG6 208 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-206ENST00000441438 DEFB124Q8NES8 71 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 R4GMQ9 66 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 CEP250Q9BV73 2442 aa8.05□□□□□ -1.12
SYNE2-206ENST00000441438 INS-IGF2F8WCM5 200 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 COX6A1P12074 109 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 ZNF101Q8IZC7 436 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 OR8B3Q8NGG8 313 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 MRPL30Q8TCC3 161 aaKnown RBP8.04□□□□□ -1.12
SYNE2-206ENST00000441438 DPH3P1Q9H4G8 78 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 SLC39A9Q9NUM3 307 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 SPTBN4Q9H254 2564 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 TRGV11A0A075B6L2 103 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 PGPA6NDG6 321 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 LYZL4Q96KX0 146 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 FAM24AA6NFZ4 105 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 NUPR1O60356 82 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 LINC00313P59037 77 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 MSMPQ1L6U9 139 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 TVP23CQ96ET8 276 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 PGLYRP4Q96LB8 373 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 LINC00479Q96M42 142 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 ADAMTS9Q9P2N4 1935 aa8.04□□□□□ -1.12
SYNE2-206ENST00000441438 SPTBN2O15020 2390 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 LAMA5O15230 3695 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 hDV102S1A0JD36 115 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 CST7O76096 145 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 IGLL1P15814 213 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 MP68P56378 58 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 PCSK4Q6UW60 755 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 NFE4Q86UQ8 179 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 OR8A1Q8NGG7 326 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 TRBV7-7A0A0K0K1E9 115 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 CD7P09564 240 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 KRTDAPP60985 99 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 NPC2P61916 151 aa8.03□□□□□ -1.12
SYNE2-206ENST00000441438 IGHV1OR21-1A0A087WYE8 117 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 A0A0G2JRQ6 117 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 CXCL5P42830 114 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 ZNF80P51504 273 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-206ENST00000441438 CYYR1Q96J86 154 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 TIMM17AQ99595 171 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 FSTL3O95633 263 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-206ENST00000441438 ZNRF1Q8ND25 227 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 SDF2L1Q9HCN8 221 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 CACNA1GO43497 2377 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 DNAJC13O75165 2243 aa8.02□□□□□ -1.13
SYNE2-206ENST00000441438 TRBV20OR9-2A0A075B6H5 130 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 TRGV5A0A0B4J1U4 118 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 LOC389332A0A1B0GUA5 103 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 HSPB1P04792 205 aaKnown RBP8.01□□□□□ -1.13
SYNE2-206ENST00000441438 FAM218AQ96MZ4 157 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 EML6Q6ZMW3 1958 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 RAI1Q7Z5J4 1906 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-206ENST00000441438 SVILO95425 2214 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 LMO4P61968 165 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 ORMDL2Q53FV1 153 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 Q6ZPA2 131 aa8.01□□□□□ -1.13
SYNE2-206ENST00000441438 CNOT1A5YKK6 2376 aaKnown RBP8.01□□□□□ -1.13
SYNE2-206ENST00000441438 PTPRBP23467 1997 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms