RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TMEM219Q86XT9 240 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 TEX29Q8N6K0 151 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 GATD1Q8NB37 220 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 PIFOQ8TCI5 191 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 GSN-AS1Q9NRJ2 163 aa7.06□□□□□ -1.28
HDAC6-209ENST00000440653 TRAV8-1A0A0A6YYK1 113 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 G3V318 75 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 CHEK1O14757 476 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 BUB3O43684 328 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 SERF1AO75920 110 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 IGHV3-23P01764 117 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 RAB4AP20338 218 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 SRIP30626 198 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 BMI1P35226 326 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 ARL3P36405 182 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 FOXA3P55318 350 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-209ENST00000440653 PKIAP61925 76 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 RIGQ13278 110 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 KLF5Q13887 457 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-209ENST00000440653 CLEC19AQ6UXS0 136 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 OR2D3Q8NGH3 330 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 ZC2HC1AQ96GY0 325 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 SAMD10Q9BYL1 202 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 U3KQE9 123 aa7.05□□□□□ -1.28
HDAC6-209ENST00000440653 IGHV3OR16-10A0A075B7F0 116 aa7.04□□□□□ -1.28
HDAC6-209ENST00000440653 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.04□□□□□ -1.28
HDAC6-209ENST00000440653 A0A1B0GUT8 65 aa7.04□□□□□ -1.28
HDAC6-209ENST00000440653 GRIFINA4D1Z8 144 aa7.04□□□□□ -1.28
HDAC6-209ENST00000440653 SH2D7A6NKC9 451 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-209ENST00000440653 CLEC3BP05452 202 aa7.04□□□□□ -1.28
HDAC6-209ENST00000440653 SNRPCP09234 159 aaKnown RBP7.04□□□□□ -1.28
HDAC6-209ENST00000440653 SLC35B1P78383 322 aa7.04□□□□□ -1.28
HDAC6-209ENST00000440653 C9orf152Q5JTZ5 239 aa7.04□□□□□ -1.28
HDAC6-209ENST00000440653 MS4A10Q96PG2 267 aa7.04□□□□□ -1.28
HDAC6-209ENST00000440653 PRDM13Q9H4Q3 707 aa7.04□□□□□ -1.28
HDAC6-209ENST00000440653 A0A1W2PS18 150 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 CLPSL1A2RUU4 121 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 ZNF785A8K8V0 405 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 M0R3E3 92 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 SPINK4O60575 86 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 ZNF324O75467 553 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-209ENST00000440653 FSHBP01225 129 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 IGHV4-31P0DP07 118 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 GZMBP10144 247 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 PPIFP30405 207 aaKnown RBP7.03□□□□□ -1.28
HDAC6-209ENST00000440653 SLAQ13239 276 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 TMEM256Q8N2U0 113 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 SIGLECL1Q8N7X8 197 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 GTSF1Q8WW33 167 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 SGK494Q96LW2 274 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 C17orf77Q96MU5 243 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 NOL4LQ96MY1 436 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-209ENST00000440653 TP53TG3Q9ULZ0 132 aa7.03□□□□□ -1.28
HDAC6-209ENST00000440653 A8MWP6 167 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 IGLV1-40P01703 118 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 CTRLP40313 264 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 AMTP48728 403 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 LINC00310P59036 64 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 CFHR3Q02985 330 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 LINC00322Q6ZN03 302 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-209ENST00000440653 TCF24Q7RTU0 167 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 PRR25Q96S07 402 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 PPP1R14DQ9NXH3 145 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 NAGKQ9UJ70 344 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 LENEPQ9Y5L5 61 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 RYR2Q92736 4967 aa7.02□□□□□ -1.29
HDAC6-209ENST00000440653 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-209ENST00000440653 TMEM189A5PLL7 270 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 SH2D1AO60880 128 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-209ENST00000440653 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-209ENST00000440653 PMCHP20382 165 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 CAMPP49913 170 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 LY6EQ16553 131 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 C8orf86Q6ZUL3 223 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 GLMPQ8WWB7 406 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 CHCHD1Q96BP2 118 aaKnown RBP7.01□□□□□ -1.29
HDAC6-209ENST00000440653 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 ASCL2Q99929 193 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-209ENST00000440653 VPREB3Q9UKI3 123 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 SMAD5-AS1Q9Y6J3 95 aa7.01□□□□□ -1.29
HDAC6-209ENST00000440653 LOC102724200A0A096LPH7 203 aaPredicted RBP7□□□□□ -1.29
HDAC6-209ENST00000440653 KIR2DL5BA0A0G2JN68 375 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 KIR2DL5BA0A0G2JPC4 375 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 A0A1B0GUS0 222 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 LINC01548A6NM66 108 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 HSBP1O75506 76 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 IGHG4P01861 327 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 PF4V1P10720 104 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 HIST1H1AQ02539 215 aaPredicted RBP7□□□□□ -1.29
HDAC6-209ENST00000440653 LINC01559Q495D7 138 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 TMEM78Q5T7P6 136 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 LCN12Q6JVE5 192 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 ZNF493Q6ZR52 646 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 KIR2DL5AQ8N109 375 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms