RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 M6PRP20645 277 aa11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 H2BFSP57053 126 aa11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 ERCC8Q13216 396 aa11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 CLINT1Q14677 625 aa11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 C9orf47Q6ZRZ4 202 aa11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 EXOC3-AS1Q8N2X6 119 aa11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 ZNF680Q8NEM1 530 aa11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 MRPL32Q9BYC8 188 aaKnown RBP11.36□□□□□ -0.59
SNRPD3-204ENST00000439775 PKD1P98161 4303 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 NBDYA0A0U1RRE5 68 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 GAGE12BA1L429 117 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 ZNF324O75467 553 aaPredicted RBP11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 GAGE7O76087 117 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 NMBP08949 121 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 GAGE12FP0CL80 117 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 GAGE12GP0CL81 117 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 GAGE12IP0CL82 117 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 ICAM4Q14773 271 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 MIR17HGQ75NE6 70 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 PPP1R1CQ8WVI7 109 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 LINC00588Q9Y4M8 146 aa11.35□□□□□ -0.59
SNRPD3-204ENST00000439775 TRAV26-1A0A087WT03 109 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 C17orf112F2Z3M2 114 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 H3BNG1 76 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 NBEAP1P0C6P0 100 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 PET100P0DJ07 73 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 MED14OSP0DP75 135 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 HOXA5P20719 270 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 OR5I1Q13606 314 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 ANXA2RQ3ZCQ2 193 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 C11orf72Q8NBR9 251 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 RXFP4Q8TDU9 374 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 C18orf15Q96N68 181 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 ATP5SQ99766 215 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 OR51M1Q9H341 326 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 FUT9Q9Y231 359 aa11.34□□□□□ -0.59
SNRPD3-204ENST00000439775 CD300CQ08708 224 aa11.33□□□□□ -0.6
SNRPD3-204ENST00000439775 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
SNRPD3-204ENST00000439775 Q6ZTI0 123 aa11.33□□□□□ -0.6
SNRPD3-204ENST00000439775 SSX7Q7RTT5 188 aa11.33□□□□□ -0.6
SNRPD3-204ENST00000439775 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
SNRPD3-204ENST00000439775 PAXXQ9BUH6 204 aa11.33□□□□□ -0.6
SNRPD3-204ENST00000439775 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 MPC2O95563 127 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 GPX1P07203 203 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 DEFA1P59665 94 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 DEFA3P59666 94 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 FAM122CQ6P4D5 195 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 EIF4E3Q8N5X7 224 aaKnown RBP11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 KRTAP17-1Q9BYP8 105 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 TMPRSS5Q9H3S3 457 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 GSN-AS1Q9NRJ2 163 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 HSPB11Q9Y547 144 aa11.32□□□□□ -0.6
SNRPD3-204ENST00000439775 TRBV7-9A0A0J9YWB2 115 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 SSNA1O43805 119 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 OR10J4P0C629 311 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 RNASE4P34096 147 aaKnown RBP11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 IBA57Q5T440 356 aaKnown RBP11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 PHYHIPLQ96FC7 376 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 VGLL1Q99990 258 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 ZNF492Q9P255 531 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 DNAH11Q96DT5 4516 aa11.31□□□□□ -0.6
SNRPD3-204ENST00000439775 A0A0J9YY99 117 aa11.3□□□□□ -0.6
SNRPD3-204ENST00000439775 OR7C2O60412 319 aa11.3□□□□□ -0.6
SNRPD3-204ENST00000439775 TCL1AP56279 114 aa11.3□□□□□ -0.6
SNRPD3-204ENST00000439775 PRR9Q5T870 116 aa11.3□□□□□ -0.6
SNRPD3-204ENST00000439775 UPK3BQ9BT76 320 aa11.3□□□□□ -0.6
SNRPD3-204ENST00000439775 TRGV2A0A075B6R0 118 aa11.29□□□□□ -0.6
SNRPD3-204ENST00000439775 RBAKDNA6NC62 111 aa11.29□□□□□ -0.6
SNRPD3-204ENST00000439775 ZNF138P52744 262 aa11.29□□□□□ -0.6
SNRPD3-204ENST00000439775 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
SNRPD3-204ENST00000439775 KHDC3LQ587J8 217 aa11.29□□□□□ -0.6
SNRPD3-204ENST00000439775 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
SNRPD3-204ENST00000439775 Q9H8V8 135 aa11.29□□□□□ -0.6
SNRPD3-204ENST00000439775 IGHV1OR15-1A0A075B7D0 117 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 TRGV1A0A0A0MS02 117 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 RGS13O14921 159 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 SPINK4O60575 86 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 IFNA5P01569 189 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 RPL12P30050 165 aaKnown RBP11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 CSN1S1P47710 185 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 TAS2R45P59539 299 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 MBD2Q9UBB5 411 aa11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 DYNC1H1Q14204 4646 aaKnown RBP11.28□□□□□ -0.6
SNRPD3-204ENST00000439775 RANP62826 216 aaKnown RBP11.27□□□□□ -0.61
SNRPD3-204ENST00000439775 TNP2Q05952 138 aa11.27□□□□□ -0.61
SNRPD3-204ENST00000439775 Q8TAT8 98 aa11.27□□□□□ -0.61
SNRPD3-204ENST00000439775 SCGB1C1Q8TD33 95 aa11.27□□□□□ -0.61
SNRPD3-204ENST00000439775 Q9H3A6 140 aa11.27□□□□□ -0.61
SNRPD3-204ENST00000439775 MRPS16Q9Y3D3 137 aaKnown RBP11.27□□□□□ -0.61
SNRPD3-204ENST00000439775 KLF12Q9Y4X4 402 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms