RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TMEM11P17152 192 aa11.93□□□□□ -0.5
APP-208ENST00000439274 COX8CQ7Z4L0 72 aa11.93□□□□□ -0.5
APP-208ENST00000439274 THYN1Q9P016 225 aa11.93□□□□□ -0.5
APP-208ENST00000439274 IGLC6P0CF74 106 aa11.93□□□□□ -0.5
APP-208ENST00000439274 ZFP36P26651 326 aaKnown RBP11.93□□□□□ -0.5
APP-208ENST00000439274 PPIFP30405 207 aaKnown RBP11.93□□□□□ -0.5
APP-208ENST00000439274 FBXL19-AS1Q494R0 122 aa11.93□□□□□ -0.5
APP-208ENST00000439274 RNF182Q8N6D2 247 aa11.93□□□□□ -0.5
APP-208ENST00000439274 ZFHX3Q15911 3703 aa11.93□□□□□ -0.5
APP-208ENST00000439274 RNF151Q2KHN1 245 aa11.92□□□□□ -0.5
APP-208ENST00000439274 LGALS9BQ3B8N2 356 aa11.92□□□□□ -0.5
APP-208ENST00000439274 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
APP-208ENST00000439274 LGALS9CQ6DKI2 356 aa11.92□□□□□ -0.5
APP-208ENST00000439274 PRSS57Q6UWY2 283 aa11.92□□□□□ -0.5
APP-208ENST00000439274 IGHV3OR16-13A0A075B7E8 117 aa11.92□□□□□ -0.5
APP-208ENST00000439274 IGHV3-74A0A0B4J1X5 117 aa11.92□□□□□ -0.5
APP-208ENST00000439274 C18orf15Q96N68 181 aa11.92□□□□□ -0.5
APP-208ENST00000439274 ECSCRQ19T08 205 aa11.91□□□□□ -0.5
APP-208ENST00000439274 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
APP-208ENST00000439274 IFI27L1Q96BM0 104 aa11.91□□□□□ -0.5
APP-208ENST00000439274 RNF185Q96GF1 192 aa11.91□□□□□ -0.5
APP-208ENST00000439274 C7orf71A4D174 169 aa11.91□□□□□ -0.5
APP-208ENST00000439274 BMI1P35226 326 aa11.91□□□□□ -0.5
APP-208ENST00000439274 ADORA2A-AS1P86434 159 aa11.91□□□□□ -0.5
APP-208ENST00000439274 C11orf71Q6IPW1 123 aa11.91□□□□□ -0.5
APP-208ENST00000439274 PSMG3-AS1Q96PY0 264 aa11.91□□□□□ -0.5
APP-208ENST00000439274 DKK2Q9UBU2 259 aa11.91□□□□□ -0.5
APP-208ENST00000439274 NDUFS7O75251 213 aa11.9□□□□□ -0.5
APP-208ENST00000439274 EVI2AP22794 236 aa11.9□□□□□ -0.5
APP-208ENST00000439274 C15orf32Q32M92 178 aa11.9□□□□□ -0.5
APP-208ENST00000439274 Q8N9W7 124 aa11.9□□□□□ -0.5
APP-208ENST00000439274 NCOR2Q9Y618 2525 aa11.9□□□□□ -0.5
APP-208ENST00000439274 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
APP-208ENST00000439274 SELENOKQ9Y6D0 94 aa11.9□□□□□ -0.5
APP-208ENST00000439274 GATA1P15976 413 aaPredicted RBP11.89□□□□□ -0.51
APP-208ENST00000439274 IL17RELQ6ZVW7 336 aa11.89□□□□□ -0.51
APP-208ENST00000439274 PCP2Q8IVA1 136 aa11.89□□□□□ -0.51
APP-208ENST00000439274 BOD1L2Q8IYS8 172 aa11.89□□□□□ -0.51
APP-208ENST00000439274 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
APP-208ENST00000439274 CLEC3BP05452 202 aa11.89□□□□□ -0.51
APP-208ENST00000439274 EBI3Q14213 229 aa11.89□□□□□ -0.51
APP-208ENST00000439274 NAA38Q9BRA0 125 aaKnown RBP11.89□□□□□ -0.51
APP-208ENST00000439274 NMUP48645 174 aa11.88□□□□□ -0.51
APP-208ENST00000439274 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
APP-208ENST00000439274 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
APP-208ENST00000439274 FABP5P3A8MUU1 101 aa11.88□□□□□ -0.51
APP-208ENST00000439274 SMAD7O15105 426 aaKnown RBP11.88□□□□□ -0.51
APP-208ENST00000439274 CDKN1BP46527 198 aa11.88□□□□□ -0.51
APP-208ENST00000439274 KLRB1Q12918 225 aa11.88□□□□□ -0.51
APP-208ENST00000439274 OR1N2Q8NGR9 330 aa11.88□□□□□ -0.51
APP-208ENST00000439274 ZNF502Q8TBZ5 544 aa11.88□□□□□ -0.51
APP-208ENST00000439274 DPF1Q92782 380 aa11.88□□□□□ -0.51
APP-208ENST00000439274 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
APP-208ENST00000439274 ARL6IP6Q8N6S5 226 aa11.87□□□□□ -0.51
APP-208ENST00000439274 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
APP-208ENST00000439274 ATP6V0E1O15342 81 aa11.87□□□□□ -0.51
APP-208ENST00000439274 ZNF207O43670 478 aaKnown RBP11.87□□□□□ -0.51
APP-208ENST00000439274 BUB3O43684 328 aa11.87□□□□□ -0.51
APP-208ENST00000439274 SCGB2A1O75556 95 aa11.87□□□□□ -0.51
APP-208ENST00000439274 LEPP41159 167 aa11.87□□□□□ -0.51
APP-208ENST00000439274 SEC11AP67812 179 aa11.87□□□□□ -0.51
APP-208ENST00000439274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.87□□□□□ -0.51
APP-208ENST00000439274 MAP1LC3AQ9H492 121 aa11.87□□□□□ -0.51
APP-208ENST00000439274 PRORYQ9H606 182 aa11.87□□□□□ -0.51
APP-208ENST00000439274 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
APP-208ENST00000439274 CHD8Q9HCK8 2581 aa11.86□□□□□ -0.51
APP-208ENST00000439274 FBLL1A6NHQ2 334 aaKnown RBP11.86□□□□□ -0.51
APP-208ENST00000439274 G3V318 75 aa11.86□□□□□ -0.51
APP-208ENST00000439274 MINOS1Q5TGZ0 78 aa11.86□□□□□ -0.51
APP-208ENST00000439274 C11orf21Q9P2W6 132 aa11.86□□□□□ -0.51
APP-208ENST00000439274 MINOS1-NBL1R4GNA1 71 aa11.86□□□□□ -0.51
APP-208ENST00000439274 COL6A6A6NMZ7 2263 aa11.86□□□□□ -0.51
APP-208ENST00000439274 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
APP-208ENST00000439274 A1L4Q6 167 aa11.86□□□□□ -0.51
APP-208ENST00000439274 TNFRSF6BO95407 300 aa11.86□□□□□ -0.51
APP-208ENST00000439274 CLEC19AQ6UXS0 136 aa11.86□□□□□ -0.51
APP-208ENST00000439274 Q6ZQT7 251 aa11.86□□□□□ -0.51
APP-208ENST00000439274 JMJD8Q96S16 334 aa11.86□□□□□ -0.51
APP-208ENST00000439274 SIRPDQ9H106 197 aa11.86□□□□□ -0.51
APP-208ENST00000439274 CLPSL1A2RUU4 121 aa11.85□□□□□ -0.51
APP-208ENST00000439274 OOSP1A8MZH6 123 aa11.85□□□□□ -0.51
APP-208ENST00000439274 C1orf122Q6ZSJ8 110 aa11.85□□□□□ -0.51
APP-208ENST00000439274 FAM110DQ8TAY7 271 aaPredicted RBP11.85□□□□□ -0.51
APP-208ENST00000439274 CNFNQ9BYD5 112 aa11.85□□□□□ -0.51
APP-208ENST00000439274 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
APP-208ENST00000439274 IGKV3D-20A0A0C4DH25 116 aa11.85□□□□□ -0.51
APP-208ENST00000439274 TRGV3P03979 118 aa11.85□□□□□ -0.51
APP-208ENST00000439274 ITPR1Q14643 2758 aa11.85□□□□□ -0.51
APP-208ENST00000439274 OCIAD2Q56VL3 154 aa11.85□□□□□ -0.51
APP-208ENST00000439274 AJUBAQ96IF1 538 aa11.85□□□□□ -0.51
APP-208ENST00000439274 CCDC140Q96MF4 163 aa11.85□□□□□ -0.51
APP-208ENST00000439274 GAGE12BA1L429 117 aa11.84□□□□□ -0.51
APP-208ENST00000439274 LY6DQ14210 128 aa11.84□□□□□ -0.51
APP-208ENST00000439274 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
APP-208ENST00000439274 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
APP-208ENST00000439274 ADAMTSL5Q6ZMM2 481 aa11.84□□□□□ -0.51
APP-208ENST00000439274 TTTY13Q9BZ97 58 aa11.84□□□□□ -0.51
APP-208ENST00000439274 AGPAT4-IT1Q9H0P7 198 aa11.84□□□□□ -0.51
APP-208ENST00000439274 CACNA1AO00555 2505 aa11.84□□□□□ -0.51
APP-208ENST00000439274 SRSF2Q01130 221 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms