RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SLC25A4P12235 298 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 CCL4P13236 92 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 TPT1P13693 172 aaKnown RBP2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 SLC25A16P16260 332 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 DYNLT1P63172 113 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q0VG73 95 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 SS18Q15532 418 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 OR2T2Q6IF00 324 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF322Q6U7Q0 402 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 UNQ5815/PRO19632Q6UWF5 114 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 KRTAP7-1Q8IUC3 87 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 FAM216BQ8N7L0 139 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 TMEM106BQ9NUM4 274 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 OR5V1Q9UGF6 321 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 ADAMTS7Q9UKP4 1686 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 ALPK3Q96L96 1907 aa2.4□□□□□ -2.02
HMGB1P12-201ENST00000438594 ECM29Q5VYK3 1845 aa2.4□□□□□ -2.02
HMGB1P12-201ENST00000438594 ATP7BP35670 1465 aa2.4□□□□□ -2.02
HMGB1P12-201ENST00000438594 CDK12Q9NYV4 1490 aaPredicted RBP2.4□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF638Q14966 1978 aaKnown RBP2.4□□□□□ -2.02
HMGB1P12-201ENST00000438594 ALKQ9UM73 1620 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 TRBV24-1A0A075B6N3 115 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGHV3-64DA0A0J9YX35 117 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 TMEM223A0PJW6 202 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 A6NN06 94 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 COLCA2A8K830 154 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 C17orf51A8MQB3 221 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 G3V3Q6 166 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 H3BMM0 161 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 NDUFB6O95139 128 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 GYPBP06028 91 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 FUSP35637 526 aaKnown RBP eCLIP2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 PCBD1P61457 104 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 LSM3P62310 102 aaKnown RBP2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 SUPT4H1P63272 117 aaKnown RBP2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 MRPS36P82909 103 aaKnown RBP2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 MIAQ16674 131 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 IQCJQ1A5X6 159 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 TDRG1Q3Y452 100 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 SPRNQ5BIV9 151 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZC2HC1BQ5TFG8 222 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 OR5AS1Q8N127 324 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 CCL4L1Q8NHW4 92 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 SMCR5Q8TEV8 140 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 C10orf82Q8WW14 230 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 UBE2WQ96B02 151 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 DSCR8Q96T75 97 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 LINC00574Q9H8X3 128 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 AP4S1Q9Y587 144 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 U3KQK5 164 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 DOCK8Q8NF50 2099 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 EML6Q6ZMW3 1958 aa2.4□□□□□ -2.03
HMGB1P12-201ENST00000438594 ABCC6O95255 1503 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 MYH7BA7E2Y1 1941 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNFX1Q9P2E3 1918 aaKnown RBP2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 LMO7Q8WWI1 1683 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 A0A1W2PP18 115 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 GRIFINA4D1Z8 144 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 C11orf94C9JXX5 98 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 EDF1O60869 148 aaKnown RBP2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 HYPMO75409 117 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 NPYP01303 97 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNF14P17017 642 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 PEA15Q15121 130 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 C9orf129Q5T035 196 aaKnown RBP2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 Q6P435 159 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 ALKAL2Q6UX46 152 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 SDIM1Q6ZPB5 146 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 MIR7-3HGQ8N6C7 128 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 LINC01560Q8TB33 94 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 C10orf105Q8TEF2 133 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 CLEC2BQ92478 149 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 FGF13Q92913 245 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 MRPS24Q96EL2 167 aaKnown RBP2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 IMMP2LQ96T52 175 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 NABP2Q9BQ15 211 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNRD1Q9P1U0 126 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNF222Q9UK12 451 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 POLEQ07864 2286 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 CRYBG1Q9Y4K1 1723 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 CITO14578 2027 aa2.39□□□□□ -2.03
HMGB1P12-201ENST00000438594 RBBP6Q7Z6E9 1792 aaKnown RBP2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 MYH6P13533 1939 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 MYH9P35579 1960 aaKnown RBP2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 RBAKDNA6NC62 111 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 FAM24AA6NFZ4 105 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 A8MUU9 505 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNF736B4DX44 427 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 K7EP34 96 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 TCL1BO95988 128 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 APOC3P02656 99 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 SHBGP04278 402 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 NMBP08949 121 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 FABP4P15090 132 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 NPC2P61916 151 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 NOTCH2Q04721 2471 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 ITSN1Q15811 1721 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 IL17AQ16552 155 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 KRTAP13-3Q3SY46 172 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms