RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SLC17A3O00476 420 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 MBPP02686 304 aaPredicted RBP5.41□□□□□ -1.54
VPS50-204ENST00000438395 BAXQ07812 192 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 NRARPQ7Z6K4 114 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 ODF3Q96PU9 254 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 MGST2Q99735 147 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 PARD6GQ9BYG4 376 aaPredicted RBP5.41□□□□□ -1.54
VPS50-204ENST00000438395 C20orf85Q9H1P6 137 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 AAMDCQ9H7C9 122 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 PTTG2Q9NZH5 202 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 TIMM9Q9Y5J7 89 aa5.41□□□□□ -1.54
VPS50-204ENST00000438395 TRGV1A0A0A0MS02 117 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 A0A1W2PPQ1 181 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 C7orf71A4D174 169 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 H3BNG1 76 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 CCSO14618 274 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 MRPS12O15235 138 aaKnown RBP5.4□□□□□ -1.54
VPS50-204ENST00000438395 CST7O76096 145 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 IGLC2P0DOY2 106 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 HIST1H1EP10412 219 aaKnown RBP5.4□□□□□ -1.54
VPS50-204ENST00000438395 IL7P13232 177 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 ARL16Q0P5N6 197 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 BAK1Q16611 211 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 SPATA12Q7Z6I5 190 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 Q9H3A6 140 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 PRELID1Q9Y255 219 aa5.4□□□□□ -1.54
VPS50-204ENST00000438395 MRPS16Q9Y3D3 137 aaKnown RBP5.4□□□□□ -1.54
VPS50-204ENST00000438395 PRAC2D3DTV9 90 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 H3BQ15 152 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 ZNF253O75346 499 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 SLC25A5P05141 298 aaKnown RBP5.39□□□□□ -1.55
VPS50-204ENST00000438395 CT45A10P0DMU9 189 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 FGF7P21781 194 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 S100A11P31949 105 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 DAZ2Q13117 558 aaKnown RBP5.39□□□□□ -1.55
VPS50-204ENST00000438395 TMEM78Q5T7P6 136 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 MIC13Q5XKP0 118 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 Q6ZTI0 123 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 TMEM37Q8WXS4 190 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 MRPL53Q96EL3 112 aaKnown RBP5.39□□□□□ -1.55
VPS50-204ENST00000438395 ARPC5LQ9BPX5 153 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 UPK3BQ9BT76 320 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 GPN1Q9HCN4 374 aaPredicted RBP5.39□□□□□ -1.55
VPS50-204ENST00000438395 KCNIP2Q9NS61 270 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 SLC39A9Q9NUM3 307 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 NUDT15Q9NV35 164 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 ZNF586Q9NXT0 402 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 FUT9Q9Y231 359 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 WDR83OSQ9Y284 106 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 NACAE9PAV3 2078 aa5.39□□□□□ -1.55
VPS50-204ENST00000438395 TRBV19A0A075B6N1 114 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 TRAV6A0A075B6T7 132 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 TRAV5A0A0B4J249 113 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 LYRM1O43325 122 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 MPDU1O75352 247 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 GPX1P07203 203 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 BTF3P20290 206 aaKnown RBP5.38□□□□□ -1.55
VPS50-204ENST00000438395 RNASE4P34096 147 aaKnown RBP5.38□□□□□ -1.55
VPS50-204ENST00000438395 BTCP35070 178 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 RPL29P47914 159 aaKnown RBP5.38□□□□□ -1.55
VPS50-204ENST00000438395 SULT1A1P50225 295 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 PDE6HQ13956 83 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 MORN5Q5VZ52 161 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 EIF4E3Q8N5X7 224 aaKnown RBP5.38□□□□□ -1.55
VPS50-204ENST00000438395 LINC00612Q8N6U2 182 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 ZNF431Q8TF32 576 aaPredicted RBP5.38□□□□□ -1.55
VPS50-204ENST00000438395 BLNKQ8WV28 456 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 SAT2Q96F10 170 aaPredicted RBP5.38□□□□□ -1.55
VPS50-204ENST00000438395 C2orf50Q96LR7 162 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 LINC00477Q96M19 166 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 GSN-AS1Q9NRJ2 163 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 LYRM2Q9NU23 88 aaPredicted RBP5.38□□□□□ -1.55
VPS50-204ENST00000438395 ICOSQ9Y6W8 199 aa5.38□□□□□ -1.55
VPS50-204ENST00000438395 FAM24AA6NFZ4 105 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 M0R3E3 92 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 SIVA1O15304 175 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 TCRBP04435 133 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 ERVFC1-1P60608 527 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 ERCC8Q13216 396 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 ATP6V1FQ16864 119 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 ESRGQ1W209 222 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 PCNPQ8WW12 178 aaKnown RBP5.37□□□□□ -1.55
VPS50-204ENST00000438395 SEC22CQ9BRL7 303 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 RBM38Q9H0Z9 239 aaKnown RBP5.37□□□□□ -1.55
VPS50-204ENST00000438395 SCRT2Q9NQ03 307 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 TMEM14CQ9P0S9 112 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
VPS50-204ENST00000438395 PKD1P98161 4303 aa5.37□□□□□ -1.55
VPS50-204ENST00000438395 TRAV9-2A0A087WT02 112 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 IGKV2-40A0A087WW87 121 aaPredicted RBP5.36□□□□□ -1.55
VPS50-204ENST00000438395 NXPH4O95158 308 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 IGKV2D-40P01614 121 aaPredicted RBP5.36□□□□□ -1.55
VPS50-204ENST00000438395 IGHV3-53P01767 116 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 PYYP10082 97 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 CSN1S1P47710 185 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 TCL1AP56279 114 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 LINC00315P59091 139 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 ZNF415Q09FC8 603 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 SLAQ13239 276 aa5.36□□□□□ -1.55
VPS50-204ENST00000438395 BTN1A1Q13410 526 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms