RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 HBE1P02100 147 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 STAG3L2P0CL84 134 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 STAG3L3P0CL85 134 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 ID1P41134 155 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 RAB5CP51148 216 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 TNP2Q05952 138 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 SAMD13Q5VXD3 122 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 SSX7Q7RTT5 188 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 C15orf53Q8NAA6 179 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 RAB24Q969Q5 203 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 LINC00052Q96N35 136 aa12.98□□□□□ -0.33
UBXN1-203ENST00000436354 YTHDF2Q9Y5A9 579 aaKnown RBP12.98□□□□□ -0.33
UBXN1-203ENST00000436354 LOC102723971A0A1B0GUV8 181 aa12.97□□□□□ -0.33
UBXN1-203ENST00000436354 SULT1A2P50226 295 aa12.97□□□□□ -0.33
UBXN1-203ENST00000436354 DEFB1P60022 68 aa12.97□□□□□ -0.33
UBXN1-203ENST00000436354 DAD1P61803 113 aa12.97□□□□□ -0.33
UBXN1-203ENST00000436354 PQLC2Q6ZP29 291 aa12.97□□□□□ -0.33
UBXN1-203ENST00000436354 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
UBXN1-203ENST00000436354 ATG101Q9BSB4 218 aa12.97□□□□□ -0.33
UBXN1-203ENST00000436354 ZNF253O75346 499 aa12.96□□□□□ -0.33
UBXN1-203ENST00000436354 PYYP10082 97 aa12.96□□□□□ -0.33
UBXN1-203ENST00000436354 HIST1H1EP10412 219 aaKnown RBP12.96□□□□□ -0.33
UBXN1-203ENST00000436354 PSMB3P49720 205 aa12.96□□□□□ -0.33
UBXN1-203ENST00000436354 GUK1Q16774 197 aa12.96□□□□□ -0.33
UBXN1-203ENST00000436354 FXYD5Q96DB9 178 aa12.96□□□□□ -0.33
UBXN1-203ENST00000436354 PAXXQ9BUH6 204 aa12.96□□□□□ -0.33
UBXN1-203ENST00000436354 SLC35B3Q9H1N7 401 aa12.96□□□□□ -0.33
UBXN1-203ENST00000436354 OR51M1Q9H341 326 aa12.96□□□□□ -0.33
UBXN1-203ENST00000436354 H3BQ15 152 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 FHITP49789 147 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 PSG9Q00887 426 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 PDE6HQ13956 83 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 RRN3P1Q2M238 152 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 LCN15Q6UWW0 184 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 SUN5Q8TC36 379 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 SAT2Q96F10 170 aaPredicted RBP12.95□□□□□ -0.34
UBXN1-203ENST00000436354 ZNF586Q9NXT0 402 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 HSPG2P98160 4391 aa12.95□□□□□ -0.34
UBXN1-203ENST00000436354 TRBV19A0A075B6N1 114 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 ISLRO14498 428 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 OR7C2O60412 319 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 ARL14EPLP0DKL9 152 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 EBLN2Q6P2I7 272 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 C1orf158Q8N1D5 194 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 C6orf223Q8N319 242 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 RNF141Q8WVD5 230 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 MBD3L1Q8WWY6 194 aa12.94□□□□□ -0.34
UBXN1-203ENST00000436354 NBDYA0A0U1RRE5 68 aa12.93□□□□□ -0.34
UBXN1-203ENST00000436354 EIF3GO75821 320 aaKnown RBP eCLIP12.93□□□□□ -0.34
UBXN1-203ENST00000436354 CXorf1O96002 111 aa12.93□□□□□ -0.34
UBXN1-203ENST00000436354 UBE2L3P68036 154 aaKnown RBP12.93□□□□□ -0.34
UBXN1-203ENST00000436354 ALKAL2Q6UX46 152 aa12.93□□□□□ -0.34
UBXN1-203ENST00000436354 Q8N1X5 172 aa12.93□□□□□ -0.34
UBXN1-203ENST00000436354 SLC50A1Q9BRV3 221 aa12.93□□□□□ -0.34
UBXN1-203ENST00000436354 ZNF331Q9NQX6 463 aaPredicted RBP12.93□□□□□ -0.34
UBXN1-203ENST00000436354 TRAV8-2A0A0B4J237 113 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 MAP1LC3B2A6NCE7 125 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 SLC17A3O00476 420 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 HMGB3O15347 200 aaKnown RBP12.92□□□□□ -0.34
UBXN1-203ENST00000436354 NDUFB4O95168 129 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 NBEAP1P0C6P0 100 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 GCHFRP30047 84 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 FAM74A1Q5RGS3 127 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 FAM213BQ8TBF2 198 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 MAP1LC3BQ9GZQ8 125 aa12.92□□□□□ -0.34
UBXN1-203ENST00000436354 OR10J4P0C629 311 aa12.91□□□□□ -0.34
UBXN1-203ENST00000436354 TEX261Q6UWH6 196 aa12.91□□□□□ -0.34
UBXN1-203ENST00000436354 ZNRF2Q8NHG8 242 aa12.91□□□□□ -0.34
UBXN1-203ENST00000436354 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
UBXN1-203ENST00000436354 TMEM208Q9BTX3 173 aa12.91□□□□□ -0.34
UBXN1-203ENST00000436354 TRAV1-1A0A0B4J248 108 aa12.9□□□□□ -0.34
UBXN1-203ENST00000436354 A0A0J9YX75 114 aa12.9□□□□□ -0.34
UBXN1-203ENST00000436354 TMEM167BQ9NRX6 74 aa12.9□□□□□ -0.34
UBXN1-203ENST00000436354 LYRM9A8MSI8 78 aa12.89□□□□□ -0.35
UBXN1-203ENST00000436354 F6UB75 175 aa12.89□□□□□ -0.35
UBXN1-203ENST00000436354 H3BTX0 84 aa12.89□□□□□ -0.35
UBXN1-203ENST00000436354 SNRPCP09234 159 aaKnown RBP12.89□□□□□ -0.35
UBXN1-203ENST00000436354 H2AFB1P0C5Y9 115 aa12.89□□□□□ -0.35
UBXN1-203ENST00000436354 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
UBXN1-203ENST00000436354 BLNKQ8WV28 456 aa12.89□□□□□ -0.35
UBXN1-203ENST00000436354 C20orf173Q96LM9 149 aa12.89□□□□□ -0.35
UBXN1-203ENST00000436354 IGF2BP2-AS1Q96M15 143 aa12.89□□□□□ -0.35
UBXN1-203ENST00000436354 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
UBXN1-203ENST00000436354 CCL18P55774 89 aa12.88□□□□□ -0.35
UBXN1-203ENST00000436354 ZNF680Q8NEM1 530 aa12.88□□□□□ -0.35
UBXN1-203ENST00000436354 MRPL53Q96EL3 112 aaKnown RBP12.88□□□□□ -0.35
UBXN1-203ENST00000436354 SCRT2Q9NQ03 307 aa12.88□□□□□ -0.35
UBXN1-203ENST00000436354 PSG3Q16557 428 aa12.87□□□□□ -0.35
UBXN1-203ENST00000436354 RNF182Q8N6D2 247 aa12.87□□□□□ -0.35
UBXN1-203ENST00000436354 LRRC20Q8TCA0 184 aa12.87□□□□□ -0.35
UBXN1-203ENST00000436354 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
UBXN1-203ENST00000436354 ARL2-SNX15V9GYD0 113 aa12.87□□□□□ -0.35
UBXN1-203ENST00000436354 A8MTW9 85 aa12.86□□□□□ -0.35
UBXN1-203ENST00000436354 NUDT3O95989 172 aa12.86□□□□□ -0.35
UBXN1-203ENST00000436354 IFNA7P01567 189 aa12.86□□□□□ -0.35
UBXN1-203ENST00000436354 IGFL4Q6B9Z1 124 aa12.86□□□□□ -0.35
UBXN1-203ENST00000436354 LYPD6BQ8NI32 183 aa12.86□□□□□ -0.35
UBXN1-203ENST00000436354 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
UBXN1-203ENST00000436354 PRELID1Q9Y255 219 aa12.86□□□□□ -0.35
UBXN1-203ENST00000436354 A0A1W2PRE2 83 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms