RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 SHISA2Q6UWI4 295 aa11.29□□□□□ -0.6
TMEM40-204ENST00000435218 PRNTQ86SH4 94 aa11.29□□□□□ -0.6
TMEM40-204ENST00000435218 WFDC3Q8IUB2 231 aa11.29□□□□□ -0.6
TMEM40-204ENST00000435218 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
TMEM40-204ENST00000435218 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
TMEM40-204ENST00000435218 RPS10P5Q9NQ39 176 aa11.29□□□□□ -0.6
TMEM40-204ENST00000435218 BIN3Q9NQY0 253 aa11.29□□□□□ -0.6
TMEM40-204ENST00000435218 ZNF256Q9Y2P7 627 aaPredicted RBP11.29□□□□□ -0.6
TMEM40-204ENST00000435218 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
TMEM40-204ENST00000435218 MT-ND4LP03901 98 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 ZNF688P0C7X2 276 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 TFPI2P48307 235 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 FAM231DQ6ZW35 169 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 C3orf56Q8N813 242 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 ANAPC16Q96DE5 110 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 LINC00477Q96M19 166 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 PRR25Q96S07 402 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
TMEM40-204ENST00000435218 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
TMEM40-204ENST00000435218 TRBV7-9A0A0J9YWB2 115 aa11.27□□□□□ -0.61
TMEM40-204ENST00000435218 PPP1R2P9O14990 202 aa11.27□□□□□ -0.61
TMEM40-204ENST00000435218 RNF212Q495C1 297 aa11.27□□□□□ -0.61
TMEM40-204ENST00000435218 PSMG4Q5JS54 123 aa11.27□□□□□ -0.61
TMEM40-204ENST00000435218 WFDC9Q8NEX5 89 aa11.27□□□□□ -0.61
TMEM40-204ENST00000435218 OR10J6PQ8NGY7 276 aa11.27□□□□□ -0.61
TMEM40-204ENST00000435218 SFRP2Q96HF1 295 aa11.27□□□□□ -0.61
TMEM40-204ENST00000435218 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
TMEM40-204ENST00000435218 STAB1Q9NY15 2570 aa11.26□□□□□ -0.61
TMEM40-204ENST00000435218 IZUMO1RA6ND01 250 aa11.26□□□□□ -0.61
TMEM40-204ENST00000435218 ZNF138P52744 262 aa11.26□□□□□ -0.61
TMEM40-204ENST00000435218 NHLRC2Q8NBF2 726 aa11.26□□□□□ -0.61
TMEM40-204ENST00000435218 NDFIP1Q9BT67 221 aa11.26□□□□□ -0.61
TMEM40-204ENST00000435218 OSTCQ9NRP0 149 aa11.26□□□□□ -0.61
TMEM40-204ENST00000435218 AGRNO00468 2067 aa11.26□□□□□ -0.61
TMEM40-204ENST00000435218 CXorf65A6NEN9 183 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 SCO1O75880 301 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 MGST1P10620 155 aaKnown RBP11.25□□□□□ -0.61
TMEM40-204ENST00000435218 ERCC8Q13216 396 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 OR5I1Q13606 314 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 FOXI2Q6ZQN5 318 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 FAM110AQ9BQ89 295 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 MCRIP2Q9BUT9 160 aaKnown RBP11.25□□□□□ -0.61
TMEM40-204ENST00000435218 TUBA4BQ9H853 241 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 A0A0J9YX75 114 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 C19orf71A6NCJ1 209 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
TMEM40-204ENST00000435218 CMC4P56277 68 aaPredicted RBP11.25□□□□□ -0.61
TMEM40-204ENST00000435218 IBA57Q5T440 356 aaKnown RBP11.25□□□□□ -0.61
TMEM40-204ENST00000435218 OR10G8Q8NGN5 311 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 Q8TAT8 98 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 ZC2HC1AQ96GY0 325 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 FAM19A4Q96LR4 140 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 ODF3Q96PU9 254 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 GPR61Q9BZJ8 451 aa11.25□□□□□ -0.61
TMEM40-204ENST00000435218 SAV1Q9H4B6 383 aaPredicted RBP11.25□□□□□ -0.61
TMEM40-204ENST00000435218 COL6A5A8TX70 2615 aa11.24□□□□□ -0.61
TMEM40-204ENST00000435218 F6UB75 175 aa11.24□□□□□ -0.61
TMEM40-204ENST00000435218 WIPF1O43516 503 aa11.24□□□□□ -0.61
TMEM40-204ENST00000435218 ERVFC1-1P60608 527 aa11.24□□□□□ -0.61
TMEM40-204ENST00000435218 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
TMEM40-204ENST00000435218 C15orf54Q8N8G6 183 aa11.24□□□□□ -0.61
TMEM40-204ENST00000435218 C8orf49Q96NF6 230 aa11.24□□□□□ -0.61
TMEM40-204ENST00000435218 MAP6D1Q9H9H5 199 aa11.24□□□□□ -0.61
TMEM40-204ENST00000435218 SMCO4Q9NRQ5 59 aa11.24□□□□□ -0.61
TMEM40-204ENST00000435218 A8MTW9 85 aa11.23□□□□□ -0.61
TMEM40-204ENST00000435218 H7BYZ3 331 aa11.23□□□□□ -0.61
TMEM40-204ENST00000435218 DUSP14O95147 198 aaKnown RBP11.23□□□□□ -0.61
TMEM40-204ENST00000435218 CT45A10P0DMU9 189 aa11.23□□□□□ -0.61
TMEM40-204ENST00000435218 CRISP2P16562 243 aa11.23□□□□□ -0.61
TMEM40-204ENST00000435218 BEAN1Q3B7T3 259 aa11.23□□□□□ -0.61
TMEM40-204ENST00000435218 SMUG1Q53HV7 270 aa11.23□□□□□ -0.61
TMEM40-204ENST00000435218 EBLN2Q6P2I7 272 aa11.23□□□□□ -0.61
TMEM40-204ENST00000435218 APRG1Q8IVJ8 170 aa11.23□□□□□ -0.61
TMEM40-204ENST00000435218 ZNF705DP0CH99 300 aaPredicted RBP11.22□□□□□ -0.61
TMEM40-204ENST00000435218 ZNF705BP0CI00 300 aaPredicted RBP11.22□□□□□ -0.61
TMEM40-204ENST00000435218 CD33P20138 364 aa11.22□□□□□ -0.61
TMEM40-204ENST00000435218 DEFB131AP59861 70 aa11.22□□□□□ -0.61
TMEM40-204ENST00000435218 DEFB1P60022 68 aa11.22□□□□□ -0.61
TMEM40-204ENST00000435218 ODF3L2Q3SX64 289 aa11.22□□□□□ -0.61
TMEM40-204ENST00000435218 LINC00322Q6ZN03 302 aaPredicted RBP11.22□□□□□ -0.61
TMEM40-204ENST00000435218 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
TMEM40-204ENST00000435218 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
TMEM40-204ENST00000435218 V9GYV3 84 aa11.22□□□□□ -0.61
TMEM40-204ENST00000435218 HLA-DRB4P13762 266 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 BTN1A1Q13410 526 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 PRR27Q6MZM9 219 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 TMEM88Q6PEY1 159 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 CBLN2Q8IUK8 224 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 NUDT10Q8NFP7 164 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 SPATA3Q8NHX4 192 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 NUDT11Q96G61 164 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 CLUHP3Q96NS8 147 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 HLA-DRB4X5D2U9 266 aa11.21□□□□□ -0.61
TMEM40-204ENST00000435218 CRIP1P50238 77 aa11.2□□□□□ -0.62
TMEM40-204ENST00000435218 CT83Q5H943 113 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms