RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 HLA-DMBP28068 263 aa13.08□□□□□ -0.32
SMG1P3-201ENST00000435197 DEFB131AP59861 70 aa13.08□□□□□ -0.32
SMG1P3-201ENST00000435197 NKX6-2Q9C056 277 aaPredicted RBP13.08□□□□□ -0.32
SMG1P3-201ENST00000435197 TRAV10A0A0B4J240 114 aa13.07□□□□□ -0.32
SMG1P3-201ENST00000435197 A0A1W2PRE2 83 aa13.07□□□□□ -0.32
SMG1P3-201ENST00000435197 IGFL4Q6B9Z1 124 aa13.07□□□□□ -0.32
SMG1P3-201ENST00000435197 Q6ZTC4 211 aa13.07□□□□□ -0.32
SMG1P3-201ENST00000435197 ZNF767PQ75MW2 155 aa13.07□□□□□ -0.32
SMG1P3-201ENST00000435197 MRPL53Q96EL3 112 aaKnown RBP13.07□□□□□ -0.32
SMG1P3-201ENST00000435197 Q9H3A6 140 aa13.07□□□□□ -0.32
SMG1P3-201ENST00000435197 OTORQ9NRC9 128 aa13.07□□□□□ -0.32
SMG1P3-201ENST00000435197 IGHV4-28A0A0C4DH34 117 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 A0A1B0GV50 99 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 RBMY1A1P0DJD3 496 aaKnown RBP13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 RBMY1CP0DJD4 496 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 ICAM4Q14773 271 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 RBMY1FQ15415 496 aaKnown RBP13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 EXOC3-AS1Q8N2X6 119 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 RNF182Q8N6D2 247 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 ZNF738Q8NE65 137 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 RXFP4Q8TDU9 374 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 C20orf173Q96LM9 149 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 ARL2-SNX15V9GYD0 113 aa13.06□□□□□ -0.32
SMG1P3-201ENST00000435197 PGPA6NDG6 321 aa13.05□□□□□ -0.32
SMG1P3-201ENST00000435197 CSN1S1P47710 185 aa13.05□□□□□ -0.32
SMG1P3-201ENST00000435197 RAB14P61106 215 aa13.05□□□□□ -0.32
SMG1P3-201ENST00000435197 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
SMG1P3-201ENST00000435197 ARL6IP6Q8N6S5 226 aa13.05□□□□□ -0.32
SMG1P3-201ENST00000435197 POM121L12Q8N7R1 296 aa13.05□□□□□ -0.32
SMG1P3-201ENST00000435197 RPUSD4Q96CM3 377 aaKnown RBP13.05□□□□□ -0.32
SMG1P3-201ENST00000435197 M0R2N4 97 aa13.04□□□□□ -0.32
SMG1P3-201ENST00000435197 IFNA1P01562 189 aa13.04□□□□□ -0.32
SMG1P3-201ENST00000435197 CCL20P78556 96 aa13.04□□□□□ -0.32
SMG1P3-201ENST00000435197 FOXI2Q6ZQN5 318 aa13.04□□□□□ -0.32
SMG1P3-201ENST00000435197 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
SMG1P3-201ENST00000435197 CMTM2Q8TAZ6 248 aa13.04□□□□□ -0.32
SMG1P3-201ENST00000435197 MANBALQ9NQG1 85 aa13.04□□□□□ -0.32
SMG1P3-201ENST00000435197 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 AMBPP02760 352 aa13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 MIFP14174 115 aa13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 UBE2G2P60604 165 aa13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 SUMO1P63165 101 aaKnown RBP13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 IFITM2Q01629 132 aa13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 ZNF575Q86XF7 245 aa13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 SAV1Q9H4B6 383 aaPredicted RBP13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 GNG13Q9P2W3 67 aa13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 PKD1P98161 4303 aa13.03□□□□□ -0.32
SMG1P3-201ENST00000435197 ZNF705FA8MVS1 300 aaPredicted RBP13.02□□□□□ -0.33
SMG1P3-201ENST00000435197 PAGE4O60829 102 aa13.02□□□□□ -0.33
SMG1P3-201ENST00000435197 P0DMU3 169 aa13.02□□□□□ -0.33
SMG1P3-201ENST00000435197 FAM231AP0DMU4 169 aa13.02□□□□□ -0.33
SMG1P3-201ENST00000435197 FAM231CP0DMU5 169 aa13.02□□□□□ -0.33
SMG1P3-201ENST00000435197 TAGLN2P37802 199 aaKnown RBP13.02□□□□□ -0.33
SMG1P3-201ENST00000435197 CST9LP1Q5W188 147 aa13.02□□□□□ -0.33
SMG1P3-201ENST00000435197 YTHDF2Q9Y5A9 579 aaKnown RBP13.02□□□□□ -0.33
SMG1P3-201ENST00000435197 A0A0J9YX75 114 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 M0R3E3 92 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 DUSP14O95147 198 aaKnown RBP13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 SLC25A5P05141 298 aaKnown RBP13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 NMBP08949 121 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 GIG44P09565 113 aaPredicted RBP13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 LGALS9BQ3B8N2 356 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 ACTL10Q5JWF8 245 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 STHQ8IWL8 128 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 C5orf17Q8NAS9 161 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 OR10J6PQ8NGY7 276 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 TXNDC17Q9BRA2 123 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 TCEAL7Q9BRU2 100 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 AGRNO00468 2067 aa13.01□□□□□ -0.33
SMG1P3-201ENST00000435197 KNCNA6PVL3 124 aa13□□□□□ -0.33
SMG1P3-201ENST00000435197 GGTLC3B5MD39 225 aa13□□□□□ -0.33
SMG1P3-201ENST00000435197 HLA-DRB4P13762 266 aa13□□□□□ -0.33
SMG1P3-201ENST00000435197 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
SMG1P3-201ENST00000435197 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
SMG1P3-201ENST00000435197 X6R8D5 127 aa13□□□□□ -0.33
SMG1P3-201ENST00000435197 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
SMG1P3-201ENST00000435197 F6UZH7 168 aa12.99□□□□□ -0.33
SMG1P3-201ENST00000435197 H3BMM0 161 aa12.99□□□□□ -0.33
SMG1P3-201ENST00000435197 CLUHP3Q96NS8 147 aa12.99□□□□□ -0.33
SMG1P3-201ENST00000435197 EPDR1Q9UM22 224 aa12.99□□□□□ -0.33
SMG1P3-201ENST00000435197 DEFB131BA0A096LNP1 70 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 RBAKDNA6NC62 111 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 DIRC3C9JPN6 131 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 PRAC2D3DTV9 90 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 F6UB75 175 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 K7EQM0 130 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 GDF5OSQ5U4N7 250 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 TRPT1Q86TN4 253 aaKnown RBP12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 CCDC28AQ8IWP9 274 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 PCNPQ8WW12 178 aaKnown RBP12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 HIST1H2BAQ96A08 127 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 VAX2Q9UIW0 290 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 CELA1Q9UNI1 258 aa12.98□□□□□ -0.33
SMG1P3-201ENST00000435197 BCL2P10415 239 aa12.97□□□□□ -0.33
SMG1P3-201ENST00000435197 DEFB1P60022 68 aa12.97□□□□□ -0.33
SMG1P3-201ENST00000435197 C12orf74Q32Q52 190 aa12.97□□□□□ -0.33
SMG1P3-201ENST00000435197 CLLU1Q5K131 121 aa12.97□□□□□ -0.33
SMG1P3-201ENST00000435197 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
SMG1P3-201ENST00000435197 LINC00477Q96M19 166 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms