RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
HLA-DQB2-231ENST00000435145 FABP5P3A8MUU1 101 aa12.39□□□□□ -0.43
HLA-DQB2-231ENST00000435145 LINC01559Q495D7 138 aa12.39□□□□□ -0.43
HLA-DQB2-231ENST00000435145 SLC25A34Q6PIV7 304 aa12.39□□□□□ -0.43
HLA-DQB2-231ENST00000435145 CLEC19AQ6UXS0 136 aa12.39□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MCRIP2Q9BUT9 160 aaKnown RBP12.39□□□□□ -0.43
HLA-DQB2-231ENST00000435145 WNK2Q9Y3S1 2297 aa12.39□□□□□ -0.43
HLA-DQB2-231ENST00000435145 C19orf84I3L1E1 186 aa12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 CRIP2P52943 208 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 ERCC8Q13216 396 aa12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 PRORYQ9H606 182 aa12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 TP73-AS1Q9UF72 201 aa12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 CACNA1AO00555 2505 aa12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 NCR2O95944 276 aa12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 NPFFR1Q9GZQ6 430 aa12.38□□□□□ -0.43
HLA-DQB2-231ENST00000435145 TRAV8-2A0A0B4J237 113 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MUC21A0A0G2JKD1 596 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MUC21A0A140T8X8 626 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 TWIST1Q15672 202 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MUC21Q5SSG8 566 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 RNF182Q8N6D2 247 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 RNF185Q96GF1 192 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 COL6A6A6NMZ7 2263 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 LOC389332A0A1B0GUA5 103 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 NPYP01303 97 aa12.37□□□□□ -0.43
HLA-DQB2-231ENST00000435145 SPTBN1Q01082 2364 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 LINC01546A6NGU7 62 aa12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 IGHV4-39P01824 125 aa12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 ORM1P02763 201 aa12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 DPF1Q92782 380 aa12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 METTL26Q96S19 204 aa12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MOB4Q9Y3A3 225 aa12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 COX11Q9Y6N1 276 aa12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MED13LQ71F56 2210 aa12.36□□□□□ -0.43
HLA-DQB2-231ENST00000435145 H0Y8G0 127 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 CKS2P33552 79 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 UQCRFS1P47985 274 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 IL17RELQ6ZVW7 336 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 PIFOQ8TCI5 191 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 AGPAT4-IT1Q9H0P7 198 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 HIF1ANQ9NWT6 349 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 HBDP02042 147 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 PPBPP02775 128 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 HIST1H1AQ02539 215 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 LGALS9BQ3B8N2 356 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 LGALS9CQ6DKI2 356 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 PPP1R14DQ9NXH3 145 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MSRB1Q9NZV6 116 aa12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 TIMM8BQ9Y5J9 83 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB2-231ENST00000435145 IGHV3-66A0A0C4DH42 116 aa12.34□□□□□ -0.43
HLA-DQB2-231ENST00000435145 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
HLA-DQB2-231ENST00000435145 SMKR1H3BMG3 65 aa12.34□□□□□ -0.43
HLA-DQB2-231ENST00000435145 COX8AP10176 69 aa12.34□□□□□ -0.43
HLA-DQB2-231ENST00000435145 MPV17L2Q567V2 206 aa12.34□□□□□ -0.43
HLA-DQB2-231ENST00000435145 C8orf86Q6ZUL3 223 aa12.34□□□□□ -0.43
HLA-DQB2-231ENST00000435145 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
HLA-DQB2-231ENST00000435145 TRAV41A0A0B4J266 112 aa12.33□□□□□ -0.43
HLA-DQB2-231ENST00000435145 FOSL1P15407 271 aa12.33□□□□□ -0.43
HLA-DQB2-231ENST00000435145 BVES-AS1Q5T3Y7 98 aa12.33□□□□□ -0.43
HLA-DQB2-231ENST00000435145 IGHV1-69DA0A0B4J2H0 117 aa12.33□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGKV3D-20A0A0C4DH25 116 aa12.33□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGHV1-69P01742 117 aa12.33□□□□□ -0.44
HLA-DQB2-231ENST00000435145 C9orf47Q6ZRZ4 202 aa12.33□□□□□ -0.44
HLA-DQB2-231ENST00000435145 TMEM219Q86XT9 240 aa12.33□□□□□ -0.44
HLA-DQB2-231ENST00000435145 ZNF738Q8NE65 137 aa12.33□□□□□ -0.44
HLA-DQB2-231ENST00000435145 C11orf21Q9P2W6 132 aa12.33□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 TCF21O43680 179 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 GNLYP22749 145 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 PRSS57Q6UWY2 283 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 OR8A1Q8NGG7 326 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 C12orf54Q6X4T0 127 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 Q6ZVH6 145 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 GLMPQ8WWB7 406 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 MEGF9Q9H1U4 602 aa12.32□□□□□ -0.44
HLA-DQB2-231ENST00000435145 ZNF207O43670 478 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB2-231ENST00000435145 BRI3O95415 125 aa12.31□□□□□ -0.44
HLA-DQB2-231ENST00000435145 NUDT3O95989 172 aa12.31□□□□□ -0.44
HLA-DQB2-231ENST00000435145 C2orf91Q6ZV80 131 aa12.31□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
HLA-DQB2-231ENST00000435145 FGF6P10767 208 aa12.3□□□□□ -0.44
HLA-DQB2-231ENST00000435145 TMEM78Q5T7P6 136 aa12.3□□□□□ -0.44
HLA-DQB2-231ENST00000435145 MAP1LC3AQ9H492 121 aa12.3□□□□□ -0.44
HLA-DQB2-231ENST00000435145 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGF1P05019 195 aa12.3□□□□□ -0.44
HLA-DQB2-231ENST00000435145 OR1N2Q8NGR9 330 aa12.3□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IFI27L1Q96BM0 104 aa12.3□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGHV4-61A0A0C4DH41 118 aa12.29□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGHV7-4-1A0A0J9YVY3 117 aa12.29□□□□□ -0.44
HLA-DQB2-231ENST00000435145 CCL25O15444 150 aa12.29□□□□□ -0.44
HLA-DQB2-231ENST00000435145 ANKRD39Q53RE8 183 aa12.29□□□□□ -0.44
HLA-DQB2-231ENST00000435145 DEFB125Q8N687 156 aa12.29□□□□□ -0.44
HLA-DQB2-231ENST00000435145 ABCA2Q9BZC7 2435 aa12.29□□□□□ -0.44
HLA-DQB2-231ENST00000435145 CSMD1Q96PZ7 3565 aa12.29□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGHV4-4A0A075B6R2 117 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGHV3OR16-10A0A075B7F0 116 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms