RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
PTCH1-208ENST00000430669 C5orf42Q9H799 3197 aa9.15□□□□□ -0.94
PTCH1-208ENST00000430669 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
PTCH1-208ENST00000430669 J3QKU1 62 aa9.15□□□□□ -0.94
PTCH1-208ENST00000430669 SEC11AP67812 179 aa9.15□□□□□ -0.94
PTCH1-208ENST00000430669 TRAV8-6A0A0B4J262 113 aa9.15□□□□□ -0.94
PTCH1-208ENST00000430669 MEIG1Q5JSS6 88 aa9.15□□□□□ -0.94
PTCH1-208ENST00000430669 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
PTCH1-208ENST00000430669 ZNF256Q9Y2P7 627 aaPredicted RBP9.15□□□□□ -0.94
PTCH1-208ENST00000430669 A8MWP6 167 aa9.15□□□□□ -0.95
PTCH1-208ENST00000430669 K7EMI3 77 aa9.15□□□□□ -0.95
PTCH1-208ENST00000430669 WIPF2Q8TF74 440 aaPredicted RBP9.15□□□□□ -0.95
PTCH1-208ENST00000430669 PIEZO1Q92508 2521 aa9.15□□□□□ -0.95
PTCH1-208ENST00000430669 TLN1Q9Y490 2541 aaKnown RBP9.14□□□□□ -0.95
PTCH1-208ENST00000430669 ZNF815PA8K554 130 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 TMEM262E9PQX1 116 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 FOXE3Q13461 319 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 ODF3L1Q8IXM7 274 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
PTCH1-208ENST00000430669 Q8TAT8 98 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 PRR25Q96S07 402 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 GRNP28799 593 aaKnown RBP9.14□□□□□ -0.95
PTCH1-208ENST00000430669 NSUN5P1Q3KNT7 163 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 IGHV7-4-1A0A0J9YVY3 117 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 RHODO00212 210 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 DEFB113Q30KQ7 82 aa9.14□□□□□ -0.95
PTCH1-208ENST00000430669 DIAPH2-AS1Q14236 149 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 ZNF491Q8N8L2 437 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 CYYR1Q96J86 154 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 GFI1BQ5VTD9 330 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 SYS1-DBNDD2H3BUS1 97 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 OVOL3O00110 214 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 IGLV11-55A0A075B6I3 123 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 CENPVL3A0A0U1RRI6 287 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 RNF152Q8N8N0 203 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 OR2K2Q8NGT1 345 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
PTCH1-208ENST00000430669 TRPT1Q86TN4 253 aaKnown RBP9.13□□□□□ -0.95
PTCH1-208ENST00000430669 PLP1P60201 277 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 ANKRD11Q6UB99 2663 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-208ENST00000430669 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 LINC00479Q96M42 142 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 TMEM89A2RUT3 159 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 HSD52Q0P140 79 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 I3L2K1 104 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 DNAL4O96015 105 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 A8MWV9 139 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 G3V318 75 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 CD28P10747 220 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 CDKN1BP46527 198 aa9.12□□□□□ -0.95
PTCH1-208ENST00000430669 C11orf1Q9H5F2 150 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 IGLV1-47P01700 117 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 CRYGCP07315 174 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 CD33P20138 364 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 GHRHP01286 108 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 C5orf56Q8N8D9 126 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 PPIFP30405 207 aaKnown RBP9.11□□□□□ -0.95
PTCH1-208ENST00000430669 RPL36AP83881 106 aaKnown RBP9.11□□□□□ -0.95
PTCH1-208ENST00000430669 FAM104BQ5XKR9 115 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 RPL36ALQ969Q0 106 aaKnown RBP9.11□□□□□ -0.95
PTCH1-208ENST00000430669 C8orf49Q96NF6 230 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 SORL1Q92673 2214 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 IGLV2-23P01705 113 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 P0C879 139 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 C10orf105Q8TEF2 133 aa9.11□□□□□ -0.95
PTCH1-208ENST00000430669 TSSC4Q9Y5U2 329 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-208ENST00000430669 ERCC8Q13216 396 aa9.1□□□□□ -0.95
PTCH1-208ENST00000430669 FNDC4Q9H6D8 234 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-208ENST00000430669 TMEM141Q96I45 108 aa9.1□□□□□ -0.95
PTCH1-208ENST00000430669 MALP21145 153 aa9.1□□□□□ -0.95
PTCH1-208ENST00000430669 CRIP3Q6Q6R5 217 aa9.1□□□□□ -0.95
PTCH1-208ENST00000430669 C5orf30Q96GV9 206 aa9.1□□□□□ -0.95
PTCH1-208ENST00000430669 IGHV7-81A0A0B4J1V7 117 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 TMEM238C9JI98 176 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 H7C2G1 150 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 ARMS2P0C7Q2 107 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 MCRIP2Q9BUT9 160 aaKnown RBP9.09□□□□□ -0.95
PTCH1-208ENST00000430669 CSTL1Q9H114 145 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 K7EIM0 57 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 ZC2HC1AQ96GY0 325 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 BPTFQ12830 3046 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 TCTEX1D4Q5JR98 221 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 AMN1Q8IY45 258 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 PLEKHB2Q96CS7 222 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 ADARB2-AS1A8MUL3 147 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 FAM120AOSQ5T036 256 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 FOXI2Q6ZQN5 318 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 TMEM256Q8N2U0 113 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 TEX43Q6ZNM6 134 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 C18orf32Q8TCD1 76 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 PTPN13Q12923 2485 aa9.09□□□□□ -0.95
PTCH1-208ENST00000430669 UBE2DNLQ8IWF7 75 aa9.09□□□□□ -0.96
PTCH1-208ENST00000430669 TNFRSF6BO95407 300 aa9.08□□□□□ -0.96
PTCH1-208ENST00000430669 EIF4EBP1Q13541 118 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-208ENST00000430669 PYGO2Q9BRQ0 406 aa9.08□□□□□ -0.96
PTCH1-208ENST00000430669 MORN3Q6PF18 240 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-208ENST00000430669 BCL6BQ8N143 479 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-208ENST00000430669 HOXA3O43365 443 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms