RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 VGLL1Q99990 258 aa10.78□□□□□ -0.68
RBM39-212ENST00000429968 CHEK1O14757 476 aa10.78□□□□□ -0.68
RBM39-212ENST00000429968 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
RBM39-212ENST00000429968 LY6EQ16553 131 aa10.78□□□□□ -0.68
RBM39-212ENST00000429968 Q6ZS46 218 aa10.78□□□□□ -0.68
RBM39-212ENST00000429968 SIGLECL1Q8N7X8 197 aa10.78□□□□□ -0.68
RBM39-212ENST00000429968 GFRA4Q9GZZ7 299 aa10.78□□□□□ -0.68
RBM39-212ENST00000429968 PRAC2D3DTV9 90 aa10.77□□□□□ -0.69
RBM39-212ENST00000429968 RPL7P18124 248 aaKnown RBP10.77□□□□□ -0.69
RBM39-212ENST00000429968 KRTDAPP60985 99 aa10.77□□□□□ -0.69
RBM39-212ENST00000429968 RNF182Q8N6D2 247 aa10.77□□□□□ -0.69
RBM39-212ENST00000429968 ZFP30Q9Y2G7 519 aa10.77□□□□□ -0.69
RBM39-212ENST00000429968 KIR2DL5BA0A0G2JN68 375 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 KIR2DL5BA0A0G2JPC4 375 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 ZNF25P17030 456 aaPredicted RBP10.76□□□□□ -0.69
RBM39-212ENST00000429968 NTF3P20783 257 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 ID1P41134 155 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 ZNF80P51504 273 aaPredicted RBP10.76□□□□□ -0.69
RBM39-212ENST00000429968 KLF5Q13887 457 aaPredicted RBP10.76□□□□□ -0.69
RBM39-212ENST00000429968 ZNF575Q86XF7 245 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 KIR2DL5AQ8N109 375 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 AAMDCQ9H7C9 122 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 MOB4Q9Y3A3 225 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 UBR5O95071 2799 aaPredicted RBP10.76□□□□□ -0.69
RBM39-212ENST00000429968 FAM208BQ5VWN6 2430 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 TMSB15BA0A087X1C1 80 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 BUB3O43684 328 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 HERV-K104P63124 156 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 TEX43Q6ZNM6 134 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 LRRK2Q5S007 2527 aa10.76□□□□□ -0.69
RBM39-212ENST00000429968 K7EP13 123 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 TRBV12-3P01733 135 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 PMCHL1Q16048 86 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 C1orf194Q5T5A4 169 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 BOD1L2Q8IYS8 172 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 OR4B1Q8NGF8 309 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 USP9YO00507 2555 aaPredicted RBP10.75□□□□□ -0.69
RBM39-212ENST00000429968 A0A1B0GV72 72 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 TMEM8BA6NDV4 472 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 C3orf79P0CE67 100 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 ERCC8Q13216 396 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 TMEM208Q9BTX3 173 aa10.75□□□□□ -0.69
RBM39-212ENST00000429968 TRAV41A0A0B4J266 112 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 MUC21A0A0G2JKD1 596 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 MUC21A0A140T8X8 626 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 M0R143 59 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 HAX1O00165 279 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 SH2D1AO60880 128 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 PSG9Q00887 426 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 MUC21Q5SSG8 566 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 RNASEKQ6P5S7 137 aaKnown RBP10.74□□□□□ -0.69
RBM39-212ENST00000429968 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 MRPL52Q86TS9 123 aaKnown RBP10.74□□□□□ -0.69
RBM39-212ENST00000429968 PSMG3-AS1Q96PY0 264 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 PRR25Q96S07 402 aa10.74□□□□□ -0.69
RBM39-212ENST00000429968 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 H3BUX3 64 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 ZNF138P52744 262 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 SRSF1Q07955 248 aaKnown RBP eCLIP10.73□□□□□ -0.693e-28■■■□□ 14.6
RBM39-212ENST00000429968 LCN12Q6JVE5 192 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 LCNL1Q6ZST4 164 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 MEGF9Q9H1U4 602 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 PAM16Q9Y3D7 125 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 ZNF469Q96JG9 3925 aaPredicted RBP10.73□□□□□ -0.69
RBM39-212ENST00000429968 LOC102724200A0A096LPH7 203 aaPredicted RBP10.73□□□□□ -0.69
RBM39-212ENST00000429968 EREGO14944 169 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 BLCAPP62952 87 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 EEF1AKMT3Q96AZ1 226 aa10.73□□□□□ -0.69
RBM39-212ENST00000429968 NBPF19A0A087WUL8 3843 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 MSMBP08118 114 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 CSN1S1P47710 185 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 EBLN2Q6P2I7 272 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 MXRA5Q9NR99 2828 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 TRAV8-2A0A0B4J237 113 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 A0A1B0GUT8 65 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 NPSP0C0P6 89 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 LINC00173Q6ZV60 143 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 MAPK1IP1LQ8NDC0 245 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 SNHG12Q9BXW3 62 aa10.72□□□□□ -0.69
RBM39-212ENST00000429968 TMEM213A2RRL7 107 aa10.71□□□□□ -0.69
RBM39-212ENST00000429968 TRGV3P03979 118 aa10.71□□□□□ -0.69
RBM39-212ENST00000429968 ATP5G2Q06055 141 aa10.71□□□□□ -0.69
RBM39-212ENST00000429968 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
RBM39-212ENST00000429968 UNQ9165/PRO28630Q6UXU0 137 aa10.71□□□□□ -0.69
RBM39-212ENST00000429968 ATOH7Q8N100 152 aa10.71□□□□□ -0.69
RBM39-212ENST00000429968 KLK15Q9H2R5 256 aa10.71□□□□□ -0.69
RBM39-212ENST00000429968 A6NDX4 124 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 HSBP1O75506 76 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 CRIP2P52943 208 aaPredicted RBP10.7□□□□□ -0.7
RBM39-212ENST00000429968 LYZL1Q6UWQ5 148 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 CR1P17927 2039 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 A0A087X0K7 114 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 TRBV7-1A0A0A6YYK4 115 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 FAM181BA6NEQ2 426 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 M0R2Z0 102 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 PPIFP30405 207 aaKnown RBP10.7□□□□□ -0.7
RBM39-212ENST00000429968 Q6ZQT7 251 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
RBM39-212ENST00000429968 SELENOKQ9Y6D0 94 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms