RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 LEAP2Q969E1 77 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 ABCA12Q86UK0 2595 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 COX7A1P24310 79 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 NABP1Q96AH0 204 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 TMEM14BQ9NUH8 114 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 NDUFB8O95169 186 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 DUTP33316 252 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 TMEM86BQ8N661 226 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 A0A087WX48 190 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 FHL1Q13642 323 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 CALYQ9NYX4 217 aa6.12□□□□□ -1.43
SYNPO2-202ENST00000429713 IGKV1-5P01602 117 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 FAM236AA0A1B0GUQ0 79 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 FAM236BA0A1B0GV22 79 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 TMSB15BA0A087X1C1 80 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 VCYO14598 125 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 LEPROTO15243 131 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 A0A0B4J2C4 111 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 RHOHQ15669 191 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 FAM214BQ7L5A3 538 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 PRORYQ9H606 182 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 C11orf1Q9H5F2 150 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 PIEZO2Q9H5I5 2752 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 F5H697 171 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 H0YGX0 51 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 LTAP01374 205 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 MALP21145 153 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 SPEM2Q0P670 501 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 TRAV13-2A0A0B4J235 113 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 NDUFS7O75251 213 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 ZFP36L1Q07352 338 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 RBMY1FQ15415 496 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 C17orf98A8MV24 154 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 CD33P20138 364 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 RPL39P5Q59GN2 51 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 FOXL2NBQ6ZUU3 175 aa6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 LSM4Q9Y4Z0 139 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-202ENST00000429713 C19orf54Q5BKX5 351 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 CNTFRP26992 372 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 SERP2Q8N6R1 65 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 CSDC2Q9Y534 153 aaKnown RBP6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 C15orf62A8K5M9 175 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 SAP30O75446 220 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 HCP5Q6MZN7 132 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 COL4A3Q01955 1670 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 IGKV1-27A0A075B6S5 117 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 GFRA3O60609 400 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 A0A1B0GXF2 115 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 RFPL3SP0C7P2 107 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 HES7Q9BYE0 225 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 SS18L1O75177 396 aaPredicted RBP6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 CFC1BP0CG36 223 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 CFC1P0CG37 223 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 DUX4L9Q6RFH8 374 aaPredicted RBP6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 LOC102723996A0A087X1L8 192 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 IGLV3-19P01714 112 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 IGHV3-48P01763 117 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 CLPSP04118 112 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 PRTN3P24158 256 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 FOXC1Q12948 553 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 Q6ZSR3 168 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 RFNGQ9Y644 331 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 ZNF329Q86UD4 541 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 CCL13Q99616 98 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 VSIRQ9H7M9 311 aa6.1□□□□□ -1.43
SYNPO2-202ENST00000429713 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 CRPP02741 224 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 ZNRF1Q8ND25 227 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 TRAV24A0A0B4J272 114 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 TRBV10-2A0A0K0K1G8 114 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 F8WDY8 70 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 H7C2G1 150 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 KLK10O43240 276 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 LYPD6Q86Y78 171 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 MTORP42345 2549 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 FOXG1P55316 489 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 TMEM243Q9BU79 118 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 SDHAF1A6NFY7 115 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 M0R381 172 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 ZCCHC24Q8N2G6 241 aaKnown RBP6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 SAP25Q8TEE9 199 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 MIR17HGQ75NE6 70 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 SHISA5Q8N114 240 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 Q8TCH9 128 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 NEU4Q8WWR8 484 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 RCHY1Q96PM5 261 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 DPH3P1Q9H4G8 78 aa6.09□□□□□ -1.43
SYNPO2-202ENST00000429713 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.09□□□□□ -1.44
SYNPO2-202ENST00000429713 C12orf77C9JDV5 145 aa6.09□□□□□ -1.44
SYNPO2-202ENST00000429713 COL8A2P25067 703 aa6.09□□□□□ -1.44
SYNPO2-202ENST00000429713 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.09□□□□□ -1.44
SYNPO2-202ENST00000429713 IGLV3-12A0A075B6K2 115 aa6.09□□□□□ -1.44
SYNPO2-202ENST00000429713 HERVK_113P63121 156 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 CFAP126Q5VTH2 177 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 RNF125Q96EQ8 232 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 COX7CP15954 63 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 DEPPQ9NTK1 212 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 SUMO2P61956 95 aaKnown RBP6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 TDRG1Q3Y452 100 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 A0A0U1RQV1 116 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms