RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 OR4C5Q8NGB2 326 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 MSRB2Q9Y3D2 182 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 NPYP01303 97 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 ZFP36P26651 326 aaKnown RBP8.92□□□□□ -0.98
LINC01238-203ENST00000429456 CKS2P33552 79 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 ERASQ7Z444 233 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 OR1N2Q8NGR9 330 aa8.92□□□□□ -0.98
LINC01238-203ENST00000429456 SMKR1H3BMG3 65 aa8.91□□□□□ -0.98
LINC01238-203ENST00000429456 KLK9Q2XQG4 91 aa8.91□□□□□ -0.98
LINC01238-203ENST00000429456 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
LINC01238-203ENST00000429456 NPFFR1Q9GZQ6 430 aa8.91□□□□□ -0.98
LINC01238-203ENST00000429456 KLK9Q9UKQ9 250 aa8.91□□□□□ -0.98
LINC01238-203ENST00000429456 MUC6Q6W4X9 2439 aa8.91□□□□□ -0.98
LINC01238-203ENST00000429456 FXYD7P58549 80 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 PRSS57Q6UWY2 283 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 FAM110DQ8TAY7 271 aaPredicted RBP8.9□□□□□ -0.98
LINC01238-203ENST00000429456 ZNF502Q8TBZ5 544 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 RNF185Q96GF1 192 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 SIRPDQ9H106 197 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 CBY3A6NI87 242 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 FABP5P3A8MUU1 101 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 SNAI2O43623 268 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 CACNG7P62955 275 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 NHLH1Q02575 133 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
LINC01238-203ENST00000429456 IGHV3OR16-8A0A075B7F1 116 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 IGHV3-35A0A0C4DH35 117 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 LINC01546A6NGU7 62 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 ERCC8Q13216 396 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 TMEM97Q5BJF2 176 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 DTX2Q86UW9 622 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 BOD1L2Q8IYS8 172 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 IFI27L1Q96BM0 104 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 MSRB1Q9NZV6 116 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 PTPRZ1P23471 2315 aaPredicted RBP8.89□□□□□ -0.99
LINC01238-203ENST00000429456 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 BUB3O43684 328 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 ORM1P02763 201 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 RAB9AP51151 201 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 SEC11AP67812 179 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 C15orf32Q32M92 178 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 LINC01559Q495D7 138 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 AJUBAQ96IF1 538 aa8.89□□□□□ -0.99
LINC01238-203ENST00000429456 TACC2O95359 2948 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 NDUFS7O75251 213 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 PPBPP02775 128 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 AMMECR1LQ6DCA0 310 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 CSTL1Q9H114 145 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 DCHS2Q6V1P9 2916 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 WNK2Q9Y3S1 2297 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 CLEC3BP05452 202 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 KLRB1Q12918 225 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 ECSCRQ19T08 205 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 MAP1LC3AQ9H492 121 aa8.88□□□□□ -0.99
LINC01238-203ENST00000429456 TRAV8-6A0A0B4J262 113 aa8.87□□□□□ -0.99
LINC01238-203ENST00000429456 CLPSL1A2RUU4 121 aa8.87□□□□□ -0.99
LINC01238-203ENST00000429456 SMAD7O15105 426 aaKnown RBP8.87□□□□□ -0.99
LINC01238-203ENST00000429456 ATP6V0E1O15342 81 aa8.87□□□□□ -0.99
LINC01238-203ENST00000429456 RNF182Q8N6D2 247 aa8.87□□□□□ -0.99
LINC01238-203ENST00000429456 SLC50A1Q9BRV3 221 aa8.87□□□□□ -0.99
LINC01238-203ENST00000429456 PEF1Q9UBV8 284 aaKnown RBP8.87□□□□□ -0.99
LINC01238-203ENST00000429456 SIVA1O15304 175 aa8.86□□□□□ -0.99
LINC01238-203ENST00000429456 GAS8-AS1O95177 125 aa8.86□□□□□ -0.99
LINC01238-203ENST00000429456 UBE2E1P51965 193 aa8.86□□□□□ -0.99
LINC01238-203ENST00000429456 IL17RELQ6ZVW7 336 aa8.86□□□□□ -0.99
LINC01238-203ENST00000429456 OR9G4Q8NGQ1 327 aa8.86□□□□□ -0.99
LINC01238-203ENST00000429456 CCDC140Q96MF4 163 aa8.86□□□□□ -0.99
LINC01238-203ENST00000429456 LRBAP50851 2863 aa8.86□□□□□ -0.99
LINC01238-203ENST00000429456 C7orf71A4D174 169 aa8.86□□□□□ -0.99
LINC01238-203ENST00000429456 CSMD1Q96PZ7 3565 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 A0A1W2PPR1 153 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 A1L4Q6 167 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 TNFRSF6BO95407 300 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 FCER1GP30273 86 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
LINC01238-203ENST00000429456 DKK2Q9UBU2 259 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 TRAV8-2A0A0B4J237 113 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 IGHV3-66A0A0C4DH42 116 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 HSD52Q0P140 79 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 CLEC19AQ6UXS0 136 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 WFDC3Q8IUB2 231 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 PIFOQ8TCI5 191 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 AGPAT4-IT1Q9H0P7 198 aa8.85□□□□□ -0.99
LINC01238-203ENST00000429456 G3V318 75 aa8.84□□□□□ -0.99
LINC01238-203ENST00000429456 PPIFP30405 207 aaKnown RBP8.84□□□□□ -0.99
LINC01238-203ENST00000429456 LEPP41159 167 aa8.84□□□□□ -0.99
LINC01238-203ENST00000429456 TCTAP57738 103 aa8.84□□□□□ -0.99
LINC01238-203ENST00000429456 ADAMTSL5Q6ZMM2 481 aa8.84□□□□□ -0.99
LINC01238-203ENST00000429456 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
LINC01238-203ENST00000429456 MRPL53Q96EL3 112 aaKnown RBP8.84□□□□□ -0.99
LINC01238-203ENST00000429456 C11orf21Q9P2W6 132 aa8.84□□□□□ -0.99
LINC01238-203ENST00000429456 LINC01548A6NM66 108 aa8.83□□□□□ -1
LINC01238-203ENST00000429456 H3BRM9 83 aa8.83□□□□□ -1
LINC01238-203ENST00000429456 SAA4P35542 130 aa8.83□□□□□ -1
LINC01238-203ENST00000429456 UQCRFS1P47985 274 aa8.83□□□□□ -1
LINC01238-203ENST00000429456 PCP2Q8IVA1 136 aa8.83□□□□□ -1
LINC01238-203ENST00000429456 EEF1AKMT3Q96AZ1 226 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms