RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SRD5A1P18405 259 aa11.52□□□□□ -0.56
SYNGAP1-203ENST00000428982 RNASE6Q93091 150 aaKnown RBP11.52□□□□□ -0.56
SYNGAP1-203ENST00000428982 SPANXCQ9NY87 97 aa11.52□□□□□ -0.56
SYNGAP1-203ENST00000428982 Q9UFV3 132 aa11.52□□□□□ -0.56
SYNGAP1-203ENST00000428982 HAX1O00165 279 aa11.52□□□□□ -0.57
SYNGAP1-203ENST00000428982 NTN5Q8WTR8 489 aaPredicted RBP11.52□□□□□ -0.57
SYNGAP1-203ENST00000428982 NPYP01303 97 aa11.52□□□□□ -0.57
SYNGAP1-203ENST00000428982 RBP4P02753 201 aa11.52□□□□□ -0.57
SYNGAP1-203ENST00000428982 LINC01560Q8TB33 94 aa11.52□□□□□ -0.57
SYNGAP1-203ENST00000428982 IGHV1-18A0A0C4DH31 117 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 IGKV3-15P01624 115 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 CCL8P80075 99 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 DAZAP2Q15038 168 aaPredicted RBP11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 ZNF329Q86UD4 541 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 CD177Q8N6Q3 437 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 NFE4Q86UQ8 179 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 FAM19A5Q7Z5A7 132 aaPredicted RBP11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 MBD6Q96DN6 1003 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 ROS1P08922 2347 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 IGHV4-39P01824 125 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 SLC25A15Q9Y619 301 aa11.51□□□□□ -0.57
SYNGAP1-203ENST00000428982 SAA2P0DJI9 122 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-203ENST00000428982 CD69Q07108 199 aa11.5□□□□□ -0.57
SYNGAP1-203ENST00000428982 C15orf65H3BRN8 121 aa11.5□□□□□ -0.57
SYNGAP1-203ENST00000428982 BSPH1Q075Z2 132 aa11.5□□□□□ -0.57
SYNGAP1-203ENST00000428982 ZNF474Q6S9Z5 364 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-203ENST00000428982 ZNRF1Q8ND25 227 aa11.5□□□□□ -0.57
SYNGAP1-203ENST00000428982 LOC107984640A0A0U1RRK4 108 aa11.5□□□□□ -0.57
SYNGAP1-203ENST00000428982 LINC01559Q495D7 138 aa11.5□□□□□ -0.57
SYNGAP1-203ENST00000428982 LINC00305Q7Z4B0 112 aa11.49□□□□□ -0.57
SYNGAP1-203ENST00000428982 LRRC75A-AS1Q8N1F1 130 aa11.49□□□□□ -0.57
SYNGAP1-203ENST00000428982 FAM215AQ9Y5M1 114 aa11.49□□□□□ -0.57
SYNGAP1-203ENST00000428982 NCOR2Q9Y618 2525 aa11.49□□□□□ -0.57
SYNGAP1-203ENST00000428982 ZNF714Q96N38 554 aa11.49□□□□□ -0.57
SYNGAP1-203ENST00000428982 CCL13Q99616 98 aa11.49□□□□□ -0.57
SYNGAP1-203ENST00000428982 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
SYNGAP1-203ENST00000428982 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
SYNGAP1-203ENST00000428982 HERVK_113P63121 156 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 AMN1Q8IY45 258 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 FAM236AA0A1B0GUQ0 79 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 FAM236BA0A1B0GV22 79 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 M0R3E3 92 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 COX6CP09669 75 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 C21orf62Q9NYP8 219 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 KMT2EQ8IZD2 1858 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 ADAMTS20P59510 1910 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 H3BMM0 161 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 UBE2WQ96B02 151 aa11.48□□□□□ -0.57
SYNGAP1-203ENST00000428982 MYOD1P15172 320 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 Q6Q795 121 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 VPS13AQ96RL7 3174 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 PRR20EP86478 221 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 PRR20CP86479 221 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 PRR20DP86480 221 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 PRR20BP86481 221 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 PRR20AP86496 221 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 LEAP2Q969E1 77 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 WDFY4Q6ZS81 3184 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 IGKV2D-26A0A0A0MRZ7 120 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 TRACP01848 142 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 LINC00205P59089 165 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 IGF2RP11717 2491 aa11.47□□□□□ -0.57
SYNGAP1-203ENST00000428982 SHISA9B4DS77 424 aa11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 TANC2Q9HCD6 1990 aa11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 FRYLO94915 3013 aa11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 A0A0C4DFX4 3053 aa11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 IGKV1D-17A0A075B6S4 117 aa11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 EIF4EBP1Q13541 118 aaPredicted RBP11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 C11orf53Q8IXP5 236 aa11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 GATD1Q8NB37 220 aa11.46□□□□□ -0.57
SYNGAP1-203ENST00000428982 NDUFA7O95182 113 aa11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 NHLRC4P0CG21 123 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 C2orf82Q6UX34 121 aa11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 ZFP2Q6ZN57 461 aa11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 RPUSD1Q9UJJ7 312 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 SPTBN1Q01082 2364 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 HLA-DRB4P13762 266 aa11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.58
SYNGAP1-203ENST00000428982 FREM1Q5H8C1 2179 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 INTS1Q8N201 2190 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 SMKR1H3BMG3 65 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 PLNP26678 52 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 LOXL1Q08397 574 aaPredicted RBP11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 Q9H3A6 140 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 KLK15Q9H2R5 256 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 TFF1P04155 84 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 CD7P09564 240 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 RPL27AP46776 148 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 DLX1P56177 255 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 SRSF2Q01130 221 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 ATXN8Q156A1 80 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 AJUBAQ96IF1 538 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 SPANXDQ9BXN6 97 aa11.45□□□□□ -0.58
SYNGAP1-203ENST00000428982 PRO0461Q9UI25 63 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms