RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CCL20P78556 96 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 ERCC8Q13216 396 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 AMTNQ6UX39 209 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 C9orf47Q6ZRZ4 202 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 ZNF680Q8NEM1 530 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 VGLL1Q99990 258 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 TCEAL7Q9BRU2 100 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 AGPAT4-IT1Q9H0P7 198 aa11.09□□□□□ -0.63
VARS2-203ENST00000428017 M0R2Z0 102 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 CT45A10P0DMU9 189 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 CDKN1BP46527 198 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 ZNF138P52744 262 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 CYB561D1Q8N8Q1 229 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 HIST1H2BAQ96A08 127 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 ODF3Q96PU9 254 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 ATG101Q9BSB4 218 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 RETNQ9HD89 108 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 TP53TG1Q9Y2A0 90 aa11.08□□□□□ -0.64
VARS2-203ENST00000428017 INSP01308 110 aa11.07□□□□□ -0.64
VARS2-203ENST00000428017 GIG44P09565 113 aaPredicted RBP11.07□□□□□ -0.64
VARS2-203ENST00000428017 ATP5G3P48201 142 aa11.07□□□□□ -0.64
VARS2-203ENST00000428017 RNF183Q96D59 192 aa11.07□□□□□ -0.64
VARS2-203ENST00000428017 ZNF492Q9P255 531 aa11.07□□□□□ -0.64
VARS2-203ENST00000428017 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
VARS2-203ENST00000428017 FBLL1A6NHQ2 334 aaKnown RBP11.06□□□□□ -0.64
VARS2-203ENST00000428017 C11orf94C9JXX5 98 aa11.06□□□□□ -0.64
VARS2-203ENST00000428017 J3KRW8 73 aa11.06□□□□□ -0.64
VARS2-203ENST00000428017 PEX7O00628 323 aa11.06□□□□□ -0.64
VARS2-203ENST00000428017 TAGLN2P37802 199 aaKnown RBP11.06□□□□□ -0.64
VARS2-203ENST00000428017 Q8TAT8 98 aa11.06□□□□□ -0.64
VARS2-203ENST00000428017 IGF2BP2-AS1Q96M15 143 aa11.06□□□□□ -0.64
VARS2-203ENST00000428017 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
VARS2-203ENST00000428017 NDFIP1Q9BT67 221 aa11.06□□□□□ -0.64
VARS2-203ENST00000428017 TMEM208Q9BTX3 173 aa11.06□□□□□ -0.64
VARS2-203ENST00000428017 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
VARS2-203ENST00000428017 IGHV3OR16-12A0A075B7B8 117 aa11.05□□□□□ -0.64
VARS2-203ENST00000428017 GPX1P07203 203 aa11.05□□□□□ -0.64
VARS2-203ENST00000428017 OR11H2Q8NH07 326 aa11.05□□□□□ -0.64
VARS2-203ENST00000428017 DNAH3Q8TD57 4116 aa11.05□□□□□ -0.64
VARS2-203ENST00000428017 RARRES2Q99969 163 aa11.05□□□□□ -0.64
VARS2-203ENST00000428017 TXNDC17Q9BRA2 123 aa11.05□□□□□ -0.64
VARS2-203ENST00000428017 U3KQK5 164 aa11.05□□□□□ -0.64
VARS2-203ENST00000428017 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 TRBV7-9A0A0J9YWB2 115 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 NMBP08949 121 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 BCL2P10415 239 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 RAB14P61106 215 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 UBE2G1P62253 170 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 FLI1Q01543 452 aaPredicted RBP11.04□□□□□ -0.64
VARS2-203ENST00000428017 PMS2P11Q13670 270 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 TMEM75Q8N9X5 138 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 CSNK1G2-AS1Q8NCQ2 148 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
VARS2-203ENST00000428017 CRISP2P16562 243 aa11.03□□□□□ -0.64
VARS2-203ENST00000428017 AKR1C3P42330 323 aa11.03□□□□□ -0.64
VARS2-203ENST00000428017 MEF2BQ02080 365 aaPredicted RBP11.03□□□□□ -0.64
VARS2-203ENST00000428017 PRNTQ86SH4 94 aa11.03□□□□□ -0.64
VARS2-203ENST00000428017 SGK494Q96LW2 274 aa11.03□□□□□ -0.64
VARS2-203ENST00000428017 NIPSNAP3BQ9BS92 247 aa11.03□□□□□ -0.64
VARS2-203ENST00000428017 VAX2Q9UIW0 290 aa11.03□□□□□ -0.64
VARS2-203ENST00000428017 PSG8Q9UQ74 426 aa11.03□□□□□ -0.64
VARS2-203ENST00000428017 TRAV34A0A0B4J273 112 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 C7orf71A4D174 169 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.65
VARS2-203ENST00000428017 PDE6DO43924 150 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 RNASE4P34096 147 aaKnown RBP11.02□□□□□ -0.65
VARS2-203ENST00000428017 GFI1BQ5VTD9 330 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 TMEM256Q8N2U0 113 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 LYPD6BQ8NI32 183 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 FAM19A4Q96LR4 140 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 LINC01587Q99440 93 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 C20orf144Q9BQM9 153 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 TREM1Q9NP99 234 aa11.02□□□□□ -0.65
VARS2-203ENST00000428017 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
VARS2-203ENST00000428017 SCO2A0A1W2PP80 73 aa11.01□□□□□ -0.65
VARS2-203ENST00000428017 RBFOX3A6NFN3 312 aa11.01□□□□□ -0.65
VARS2-203ENST00000428017 S100A9P06702 114 aaKnown RBP11.01□□□□□ -0.65
VARS2-203ENST00000428017 SAPCD1Q5SSQ6 148 aa11.01□□□□□ -0.65
VARS2-203ENST00000428017 ZNF767PQ75MW2 155 aa11.01□□□□□ -0.65
VARS2-203ENST00000428017 PCNPQ8WW12 178 aaKnown RBP11.01□□□□□ -0.65
VARS2-203ENST00000428017 FMC1Q96HJ9 113 aa11.01□□□□□ -0.65
VARS2-203ENST00000428017 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
VARS2-203ENST00000428017 AGRNO00468 2067 aa11□□□□□ -0.65
VARS2-203ENST00000428017 LOC102723971A0A1B0GUV8 181 aa11□□□□□ -0.65
VARS2-203ENST00000428017 KLLNB2CW77 178 aa11□□□□□ -0.65
VARS2-203ENST00000428017 H7BYZ3 331 aa11□□□□□ -0.65
VARS2-203ENST00000428017 MIFP14174 115 aa11□□□□□ -0.65
VARS2-203ENST00000428017 KIR3DS1Q14943 382 aa11□□□□□ -0.65
VARS2-203ENST00000428017 ZNF705AQ6ZN79 300 aaPredicted RBP11□□□□□ -0.65
VARS2-203ENST00000428017 C1orf158Q8N1D5 194 aa11□□□□□ -0.65
VARS2-203ENST00000428017 ZFAND2AQ8N6M9 145 aa11□□□□□ -0.65
VARS2-203ENST00000428017 EIF5A2Q9GZV4 153 aaKnown RBP11□□□□□ -0.65
VARS2-203ENST00000428017 SMIM9A6NGZ8 99 aa10.99□□□□□ -0.65
VARS2-203ENST00000428017 IGLV2-11P01706 119 aa10.99□□□□□ -0.65
VARS2-203ENST00000428017 HTN1P15515 57 aa10.99□□□□□ -0.65
VARS2-203ENST00000428017 BTN1A1Q13410 526 aa10.99□□□□□ -0.65
VARS2-203ENST00000428017 TMEM183BQ1AE95 376 aa10.99□□□□□ -0.65
VARS2-203ENST00000428017 RRN3P1Q2M238 152 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms