RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 UBE2DNLQ8IWF7 75 aa13.58□□□□□ -0.24
HLCS-204ENST00000427746 RNF141Q8WVD5 230 aa13.58□□□□□ -0.24
HLCS-204ENST00000427746 ZNF503Q96F45 646 aa13.58□□□□□ -0.24
HLCS-204ENST00000427746 PYGO2Q9BRQ0 406 aa13.58□□□□□ -0.24
HLCS-204ENST00000427746 SMIM3Q9BZL3 60 aa13.58□□□□□ -0.24
HLCS-204ENST00000427746 ALG5Q9Y673 324 aa13.58□□□□□ -0.24
HLCS-204ENST00000427746 C7orf71A4D174 169 aa13.57□□□□□ -0.24
HLCS-204ENST00000427746 ZNF324O75467 553 aaPredicted RBP13.57□□□□□ -0.24
HLCS-204ENST00000427746 CRISP2P16562 243 aa13.57□□□□□ -0.24
HLCS-204ENST00000427746 FAM122CQ6P4D5 195 aa13.57□□□□□ -0.24
HLCS-204ENST00000427746 PHYHIPLQ96FC7 376 aa13.57□□□□□ -0.24
HLCS-204ENST00000427746 WFDC1Q9HC57 220 aa13.57□□□□□ -0.24
HLCS-204ENST00000427746 DNAH17Q9UFH2 4485 aa13.57□□□□□ -0.24
HLCS-204ENST00000427746 IGKV2-40A0A087WW87 121 aaPredicted RBP13.56□□□□□ -0.24
HLCS-204ENST00000427746 M0R2N4 97 aa13.56□□□□□ -0.24
HLCS-204ENST00000427746 IFNA5P01569 189 aa13.56□□□□□ -0.24
HLCS-204ENST00000427746 IGKV2D-40P01614 121 aaPredicted RBP13.56□□□□□ -0.24
HLCS-204ENST00000427746 CD300CQ08708 224 aa13.56□□□□□ -0.24
HLCS-204ENST00000427746 FFAR4Q5NUL3 377 aa13.56□□□□□ -0.24
HLCS-204ENST00000427746 Q6ZR54 194 aa13.56□□□□□ -0.24
HLCS-204ENST00000427746 LINC00336Q6ZUF6 198 aa13.56□□□□□ -0.24
HLCS-204ENST00000427746 SCGB1C1Q8TD33 95 aa13.56□□□□□ -0.24
HLCS-204ENST00000427746 VGLL1Q99990 258 aa13.56□□□□□ -0.24
HLCS-204ENST00000427746 OR7C2O60412 319 aa13.55□□□□□ -0.24
HLCS-204ENST00000427746 PTTG1O95997 202 aa13.55□□□□□ -0.24
HLCS-204ENST00000427746 NMBP08949 121 aa13.55□□□□□ -0.24
HLCS-204ENST00000427746 BTN1A1Q13410 526 aa13.55□□□□□ -0.24
HLCS-204ENST00000427746 LINC00467Q9BRT7 94 aa13.55□□□□□ -0.24
HLCS-204ENST00000427746 SNURFLB1AK76 121 aa13.54□□□□□ -0.24
HLCS-204ENST00000427746 RTL8CO15255 209 aa13.54□□□□□ -0.24
HLCS-204ENST00000427746 FAM3BP58499 235 aaPredicted RBP13.54□□□□□ -0.24
HLCS-204ENST00000427746 DAZ2Q13117 558 aaKnown RBP13.54□□□□□ -0.24
HLCS-204ENST00000427746 TMEM78Q5T7P6 136 aa13.54□□□□□ -0.24
HLCS-204ENST00000427746 LYPD1Q8N2G4 141 aa13.54□□□□□ -0.24
HLCS-204ENST00000427746 ZFAND2AQ8N6M9 145 aa13.54□□□□□ -0.24
HLCS-204ENST00000427746 ZNF492Q9P255 531 aa13.54□□□□□ -0.24
HLCS-204ENST00000427746 NACAE9PAV3 2078 aa13.53□□□□□ -0.24
HLCS-204ENST00000427746 IGLV2-18A0A075B6J9 118 aa13.53□□□□□ -0.24
HLCS-204ENST00000427746 RNASE4P34096 147 aaKnown RBP13.53□□□□□ -0.24
HLCS-204ENST00000427746 C11orf72Q8NBR9 251 aa13.53□□□□□ -0.24
HLCS-204ENST00000427746 GAGE12BA1L429 117 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 GAGE7O76087 117 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 NUDT3O95989 172 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 GPX1P07203 203 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 GAGE12FP0CL80 117 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 GAGE12GP0CL81 117 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 GAGE12IP0CL82 117 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 RANP62826 216 aaKnown RBP13.52□□□□□ -0.25
HLCS-204ENST00000427746 UBE2L3P68036 154 aaKnown RBP13.52□□□□□ -0.25
HLCS-204ENST00000427746 ANXA2RQ3ZCQ2 193 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 KHDC3LQ587J8 217 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 PRR9Q5T870 116 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 Q9H3A6 140 aa13.52□□□□□ -0.25
HLCS-204ENST00000427746 TRBV7-9A0A0J9YWB2 115 aa13.51□□□□□ -0.25
HLCS-204ENST00000427746 RBAKDNA6NC62 111 aa13.51□□□□□ -0.25
HLCS-204ENST00000427746 ZNF138P52744 262 aa13.51□□□□□ -0.25
HLCS-204ENST00000427746 TAS2R45P59539 299 aa13.51□□□□□ -0.25
HLCS-204ENST00000427746 EIF4E3Q8N5X7 224 aaKnown RBP13.51□□□□□ -0.25
HLCS-204ENST00000427746 ZNF680Q8NEM1 530 aa13.51□□□□□ -0.25
HLCS-204ENST00000427746 GSN-AS1Q9NRJ2 163 aa13.51□□□□□ -0.25
HLCS-204ENST00000427746 A0A1B0GVY2 172 aa13.5□□□□□ -0.25
HLCS-204ENST00000427746 EIF3GO75821 320 aaKnown RBP eCLIP13.5□□□□□ -0.25
HLCS-204ENST00000427746 HOXA5P20719 270 aa13.5□□□□□ -0.25
HLCS-204ENST00000427746 Q6ZQT7 251 aa13.5□□□□□ -0.25
HLCS-204ENST00000427746 Q6ZTI0 123 aa13.5□□□□□ -0.25
HLCS-204ENST00000427746 Q8TAT8 98 aa13.5□□□□□ -0.25
HLCS-204ENST00000427746 ATG101Q9BSB4 218 aa13.5□□□□□ -0.25
HLCS-204ENST00000427746 M6PRP20645 277 aa13.49□□□□□ -0.25
HLCS-204ENST00000427746 CSN1S1P47710 185 aa13.49□□□□□ -0.25
HLCS-204ENST00000427746 C18orf15Q96N68 181 aa13.49□□□□□ -0.25
HLCS-204ENST00000427746 MED28Q9H204 178 aa13.49□□□□□ -0.25
HLCS-204ENST00000427746 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
HLCS-204ENST00000427746 OR5I1Q13606 314 aa13.48□□□□□ -0.25
HLCS-204ENST00000427746 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
HLCS-204ENST00000427746 ZNRF2Q8NHG8 242 aa13.48□□□□□ -0.25
HLCS-204ENST00000427746 AQP10Q96PS8 301 aa13.48□□□□□ -0.25
HLCS-204ENST00000427746 TMPRSS5Q9H3S3 457 aa13.48□□□□□ -0.25
HLCS-204ENST00000427746 PRSS29PA6NIE9 313 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 DIRC3C9JPN6 131 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 TCL1AP56279 114 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 RAB2AP61019 212 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
HLCS-204ENST00000427746 RXFP4Q8TDU9 374 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 GNPNAT1Q96EK6 184 aaPredicted RBP13.47□□□□□ -0.25
HLCS-204ENST00000427746 TP53TG3Q9ULZ0 132 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 LINC00588Q9Y4M8 146 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 KLF12Q9Y4X4 402 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 PKD1P98161 4303 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 HERC2O95714 4834 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 PKHD1P08F94 4074 aa13.47□□□□□ -0.25
HLCS-204ENST00000427746 IGHV1OR15-1A0A075B7D0 117 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 H3BNG1 76 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 RGS13O14921 159 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 SPINK4O60575 86 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 CCL18P55774 89 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 ZNF266Q14584 549 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 Q5BKY6 102 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 PQLC2Q6ZP29 291 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 OTORQ9NRC9 128 aa13.46□□□□□ -0.25
HLCS-204ENST00000427746 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms