RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 C7orf71A4D174 169 aa12.98□□□□□ -0.33
GPC1-205ENST00000427506 IGKV2D-40P01614 121 aaPredicted RBP12.98□□□□□ -0.33
GPC1-205ENST00000427506 TMEM78Q5T7P6 136 aa12.98□□□□□ -0.33
GPC1-205ENST00000427506 FXYD5Q96DB9 178 aa12.98□□□□□ -0.33
GPC1-205ENST00000427506 ATG101Q9BSB4 218 aa12.98□□□□□ -0.33
GPC1-205ENST00000427506 IGLV2-18A0A075B6J9 118 aa12.97□□□□□ -0.33
GPC1-205ENST00000427506 NUDT3O95989 172 aa12.97□□□□□ -0.33
GPC1-205ENST00000427506 RNASE4P34096 147 aaKnown RBP12.97□□□□□ -0.33
GPC1-205ENST00000427506 PHYHIPLQ96FC7 376 aa12.97□□□□□ -0.33
GPC1-205ENST00000427506 GAGE12BA1L429 117 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 GAGE7O76087 117 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 GPX1P07203 203 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 GAGE12FP0CL80 117 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 GAGE12GP0CL81 117 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 GAGE12IP0CL82 117 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 CSN1S1P47710 185 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 TAS2R45P59539 299 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 UBE2L3P68036 154 aaKnown RBP12.96□□□□□ -0.33
GPC1-205ENST00000427506 BTN1A1Q13410 526 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 C9orf47Q6ZRZ4 202 aa12.96□□□□□ -0.33
GPC1-205ENST00000427506 KLLNB2CW77 178 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 PTTG1O95997 202 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 RANP62826 216 aaKnown RBP12.95□□□□□ -0.34
GPC1-205ENST00000427506 CD300CQ08708 224 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 OR5I1Q13606 314 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 LGALS9BQ3B8N2 356 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 KHDC3LQ587J8 217 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 LINC00336Q6ZUF6 198 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 FAM19A4Q96LR4 140 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 VGLL1Q99990 258 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 VPS13DQ5THJ4 4388 aa12.95□□□□□ -0.34
GPC1-205ENST00000427506 MED28Q9H204 178 aa12.94□□□□□ -0.34
GPC1-205ENST00000427506 Q9H3A6 140 aa12.94□□□□□ -0.34
GPC1-205ENST00000427506 WFDC1Q9HC57 220 aa12.94□□□□□ -0.34
GPC1-205ENST00000427506 CRISP2P16562 243 aa12.93□□□□□ -0.34
GPC1-205ENST00000427506 ZNF138P52744 262 aa12.93□□□□□ -0.34
GPC1-205ENST00000427506 ACOT6Q3I5F7 207 aaPredicted RBP12.93□□□□□ -0.34
GPC1-205ENST00000427506 LYPD1Q8N2G4 141 aa12.93□□□□□ -0.34
GPC1-205ENST00000427506 EIF4E3Q8N5X7 224 aaKnown RBP12.93□□□□□ -0.34
GPC1-205ENST00000427506 ZNF680Q8NEM1 530 aa12.93□□□□□ -0.34
GPC1-205ENST00000427506 ZNF503Q96F45 646 aa12.93□□□□□ -0.34
GPC1-205ENST00000427506 ZNF492Q9P255 531 aa12.93□□□□□ -0.34
GPC1-205ENST00000427506 A0A1W2PPV4 95 aa12.92□□□□□ -0.34
GPC1-205ENST00000427506 RGS13O14921 159 aa12.92□□□□□ -0.34
GPC1-205ENST00000427506 ZNF324O75467 553 aaPredicted RBP12.92□□□□□ -0.34
GPC1-205ENST00000427506 EIF3GO75821 320 aaKnown RBP eCLIP12.92□□□□□ -0.34
GPC1-205ENST00000427506 NMBP08949 121 aa12.92□□□□□ -0.34
GPC1-205ENST00000427506 LINC00612Q8N6U2 182 aa12.92□□□□□ -0.34
GPC1-205ENST00000427506 GSN-AS1Q9NRJ2 163 aa12.92□□□□□ -0.34
GPC1-205ENST00000427506 M6PRP20645 277 aa12.91□□□□□ -0.34
GPC1-205ENST00000427506 CCL18P55774 89 aa12.91□□□□□ -0.34
GPC1-205ENST00000427506 FAM3BP58499 235 aaPredicted RBP12.91□□□□□ -0.34
GPC1-205ENST00000427506 DAZ2Q13117 558 aaKnown RBP12.91□□□□□ -0.34
GPC1-205ENST00000427506 ZFAND2AQ8N6M9 145 aa12.91□□□□□ -0.34
GPC1-205ENST00000427506 Q8TAT8 98 aa12.91□□□□□ -0.34
GPC1-205ENST00000427506 GNPNAT1Q96EK6 184 aaPredicted RBP12.91□□□□□ -0.34
GPC1-205ENST00000427506 HYLS1Q96M11 299 aa12.91□□□□□ -0.34
GPC1-205ENST00000427506 LINC00467Q9BRT7 94 aa12.91□□□□□ -0.34
GPC1-205ENST00000427506 FRAS1Q86XX4 4008 aa12.91□□□□□ -0.34
GPC1-205ENST00000427506 RBAKDNA6NC62 111 aa12.9□□□□□ -0.34
GPC1-205ENST00000427506 ANXA2RQ3ZCQ2 193 aa12.9□□□□□ -0.34
GPC1-205ENST00000427506 PRR9Q5T870 116 aa12.9□□□□□ -0.34
GPC1-205ENST00000427506 Q6ZTI0 123 aa12.9□□□□□ -0.34
GPC1-205ENST00000427506 TRGV2A0A075B6R0 118 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 TRAV26-1A0A087WT03 109 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 A0A0J9YY99 117 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 RAB2AP61019 212 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 ZNF266Q14584 549 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 FAM74A1Q5RGS3 127 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 C11orf72Q8NBR9 251 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 CMTM2Q8TAZ6 248 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 RXFP4Q8TDU9 374 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 ARPC5LQ9BPX5 153 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 RPH3ALQ9UNE2 315 aa12.89□□□□□ -0.35
GPC1-205ENST00000427506 DNAH6Q9C0G6 4158 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 TRGV1A0A0A0MS02 117 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 PGPA6NDG6 321 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 RTL8CO15255 209 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 HOXA5P20719 270 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 SOHLH1Q5JUK2 328 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 PQLC2Q6ZP29 291 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 Q6ZR54 194 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 HSD17B11Q8NBQ5 300 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 TMPRSS5Q9H3S3 457 aa12.88□□□□□ -0.35
GPC1-205ENST00000427506 DIRC3C9JPN6 131 aa12.87□□□□□ -0.35
GPC1-205ENST00000427506 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
GPC1-205ENST00000427506 Q6ZQT7 251 aa12.87□□□□□ -0.35
GPC1-205ENST00000427506 OTORQ9NRC9 128 aa12.87□□□□□ -0.35
GPC1-205ENST00000427506 TP53TG3Q9ULZ0 132 aa12.87□□□□□ -0.35
GPC1-205ENST00000427506 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
GPC1-205ENST00000427506 DNAH10Q8IVF4 4471 aa12.86□□□□□ -0.35
GPC1-205ENST00000427506 TCL1AP56279 114 aa12.86□□□□□ -0.35
GPC1-205ENST00000427506 IBA57Q5T440 356 aaKnown RBP12.86□□□□□ -0.35
GPC1-205ENST00000427506 AQP10Q96PS8 301 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms