RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
HLA-DQB2-230ENST00000427449 ALG5Q9Y673 324 aa11.13□□□□□ -0.63
HLA-DQB2-230ENST00000427449 J3KRW8 73 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 M0R2N4 97 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 OR10J4P0C629 311 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 ICAM4Q14773 271 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 C15orf53Q8NAA6 179 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 BLNKQ8WV28 456 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 BATF3Q9NR55 127 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 PRELID1Q9Y255 219 aa11.12□□□□□ -0.63
HLA-DQB2-230ENST00000427449 IGLV2-18A0A075B6J9 118 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 C7orf71A4D174 169 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 RLN2P04090 185 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 SLC25A5P05141 298 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 ATP5G1P05496 136 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 HTN1P15515 57 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 RPL12P30050 165 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 LEPP41159 167 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 ATP5G3P48201 142 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 DAZ2Q13117 558 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 PYGO2Q9BRQ0 406 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 OR51M1Q9H341 326 aa11.11□□□□□ -0.63
HLA-DQB2-230ENST00000427449 DEFA1P59665 94 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 DEFA3P59666 94 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 Q6ZTI0 123 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 LINC00336Q6ZUF6 198 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 Q8TAT8 98 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 SMIM3Q9BZL3 60 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 PPP1R14DQ9NXH3 145 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 ZNF492Q9P255 531 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 PCLOQ9Y6V0 5065 aa11.1□□□□□ -0.63
HLA-DQB2-230ENST00000427449 F5H768 121 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 G3V3Q6 166 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 SSNA1O43805 119 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 NMBP08949 121 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 ANXA2RQ3ZCQ2 193 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 Q5BKY6 102 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 FAM122CQ6P4D5 195 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 KRTAP17-1Q9BYP8 105 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 KRTAP1-5Q9BYS1 174 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 TMPRSS5Q9H3S3 457 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 TP53TG3Q9ULZ0 132 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 LINC00588Q9Y4M8 146 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 HSPG2P98160 4391 aa11.09□□□□□ -0.63
HLA-DQB2-230ENST00000427449 FFAR4Q5NUL3 377 aa11.08□□□□□ -0.64
HLA-DQB2-230ENST00000427449 KCNIP2Q9NS61 270 aa11.08□□□□□ -0.64
HLA-DQB2-230ENST00000427449 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
HLA-DQB2-230ENST00000427449 RYR1P21817 5038 aa11.08□□□□□ -0.64
HLA-DQB2-230ENST00000427449 LRP1BQ9NZR2 4599 aa11.08□□□□□ -0.64
HLA-DQB2-230ENST00000427449 GAGE12BA1L429 117 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 GAGE7O76087 117 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 PTTG1O95997 202 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 GAGE12FP0CL80 117 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 GAGE12GP0CL81 117 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 GAGE12IP0CL82 117 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 VSIG2Q96IQ7 327 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 Q9H3A6 140 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 GSN-AS1Q9NRJ2 163 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
HLA-DQB2-230ENST00000427449 TRBV7-9A0A0J9YWB2 115 aa11.06□□□□□ -0.64
HLA-DQB2-230ENST00000427449 RBAKDNA6NC62 111 aa11.06□□□□□ -0.64
HLA-DQB2-230ENST00000427449 SPINK4O60575 86 aa11.06□□□□□ -0.64
HLA-DQB2-230ENST00000427449 PET100P0DJ07 73 aa11.06□□□□□ -0.64
HLA-DQB2-230ENST00000427449 TCL1AP56279 114 aa11.06□□□□□ -0.64
HLA-DQB2-230ENST00000427449 FAM3BP58499 235 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB2-230ENST00000427449 RAB2AP61019 212 aa11.06□□□□□ -0.64
HLA-DQB2-230ENST00000427449 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
HLA-DQB2-230ENST00000427449 TRAV26-1A0A087WT03 109 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 PRSS29PA6NIE9 313 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 C17orf112F2Z3M2 114 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 OR7C2O60412 319 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 IBA57Q5T440 356 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 UBE2DNLQ8IWF7 75 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 LYPD1Q8N2G4 141 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 EIF4E3Q8N5X7 224 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 TVP23CQ96ET8 276 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 AQP10Q96PS8 301 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 AAMDCQ9H7C9 122 aa11.05□□□□□ -0.64
HLA-DQB2-230ENST00000427449 RNF222A6NCQ9 220 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 DIRC3C9JPN6 131 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 H3BNG1 76 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 RNASE4P34096 147 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 ZNF138P52744 262 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 ZNF266Q14584 549 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 KHDC3LQ587J8 217 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 Q6AWC8 147 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 OR2G3Q8NGZ4 309 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
HLA-DQB2-230ENST00000427449 APOBP04114 4563 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB2-230ENST00000427449 NUDT3O95989 172 aa11.03□□□□□ -0.64
HLA-DQB2-230ENST00000427449 M6PRP20645 277 aa11.03□□□□□ -0.64
HLA-DQB2-230ENST00000427449 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB2-230ENST00000427449 SSX7Q7RTT5 188 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms