RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 RAB1BQ9H0U4 201 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 DYNLRB1Q9NP97 96 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 ASCL3Q9NQ33 180 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 TMEM14CQ9P0S9 112 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 EPDR1Q9UM22 224 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 PPIAL4AQ9Y536 164 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 SELENOKQ9Y6D0 94 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 CADP27708 2225 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 VPS13AQ96RL7 3174 aa3.84□□□□□ -1.79
LINC00458-202ENST00000427299 PPIAL4CA0A0B4J2A2 164 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 OR4C46A6NHA9 309 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 F2Z2F3 143 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 CRXO43186 299 aaPredicted RBP3.83□□□□□ -1.8
LINC00458-202ENST00000427299 NUPR1O60356 82 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 SPINK4O60575 86 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 LEPROTL1O95214 131 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 MOSP00540 346 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 IGHV3-7P01780 117 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 TCRAP04437 139 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 CT45A10P0DMU9 189 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 PPIAL4GP0DN37 164 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 PYYP10082 97 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 TSPOP30536 169 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 MYCNOSP40205 109 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 CSN1S1P47710 185 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 RPS20P60866 119 aaKnown RBP3.83□□□□□ -1.8
LINC00458-202ENST00000427299 RIGQ13278 110 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 PDE6HQ13956 83 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 TNXAQ16473 311 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 DEFB109BQ30KR1 87 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 PSMG4Q5JS54 123 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 LEMD1Q68G75 181 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 ZNF562Q6V9R5 426 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 Q6ZS92 163 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 LYPD1Q8N2G4 141 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 DEFB123Q8N688 67 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 Q8N976 141 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 GATD1Q8NB37 220 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 H1FXQ92522 213 aaKnown RBP3.83□□□□□ -1.8
LINC00458-202ENST00000427299 RNF5Q99942 180 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 VGLL1Q99990 258 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 RASL11BQ9BPW5 248 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 MS4A6AQ9H2W1 248 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 Q9H3A6 140 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 KAAG1Q9UBP8 84 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 KLF12Q9Y4X4 402 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 F11RQ9Y624 299 aaKnown RBP3.83□□□□□ -1.8
LINC00458-202ENST00000427299 ZGRF1Q86YA3 2104 aa3.83□□□□□ -1.8
LINC00458-202ENST00000427299 URB1O60287 2271 aaKnown RBP3.82□□□□□ -1.8
LINC00458-202ENST00000427299 ARFGEF3Q5TH69 2177 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 IGKV1D-37A0A075B6S9 117 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 TRAV30A0A087WSZ9 112 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.82□□□□□ -1.8
LINC00458-202ENST00000427299 IGHV1-24A0A0C4DH33 117 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 IGLC7A0M8Q6 106 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 C19orf71A6NCJ1 209 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 FSTL3O95633 263 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 IGLV2-23P01705 113 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 CRYGCP07315 174 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 NBEAP1P0C6P0 100 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 IGHV1-8P0DP01 117 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 GATA2P23769 480 aaPredicted RBP3.82□□□□□ -1.8
LINC00458-202ENST00000427299 HTR1DP28221 377 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 SLC35B1P78383 322 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 HIST1H1AQ02539 215 aaPredicted RBP3.82□□□□□ -1.8
LINC00458-202ENST00000427299 WT1-ASQ06250 92 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 TMEM155Q4W5P6 130 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 Q56UQ5 140 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 SLC25A34Q6PIV7 304 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 Q71RC1 249 aaPredicted RBP3.82□□□□□ -1.8
LINC00458-202ENST00000427299 BPIFA4PQ86YQ2 179 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 MUC15Q8N387 334 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 DEFB108BQ8NET1 73 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 OR10W1Q8NGF6 305 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 OR10AG1Q8NH19 301 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 RPEQ96AT9 228 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 FAM122AQ96E09 287 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 NDFIP1Q9BT67 221 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 CLEC7AQ9BXN2 247 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 TMEM133Q9H2Q1 129 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 RPH3ALQ9UNE2 315 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 FAM215AQ9Y5M1 114 aa3.82□□□□□ -1.8
LINC00458-202ENST00000427299 FRYLO94915 3013 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 TRAV26-1A0A087WT03 109 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 LOC102724200A0A096LPH7 203 aaPredicted RBP3.81□□□□□ -1.8
LINC00458-202ENST00000427299 A0A1B0GUT8 65 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 PGPA6NDG6 321 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 SYS1-DBNDD2H3BUS1 97 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 H7C423 109 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 CA1P00915 261 aaPredicted RBP3.81□□□□□ -1.8
LINC00458-202ENST00000427299 CCL3L1P16619 93 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 ORM2P19652 201 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 LOXP28300 417 aaPredicted RBP3.81□□□□□ -1.8
LINC00458-202ENST00000427299 CEACAM3P40198 252 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 LYZP61626 148 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 GNG5P63218 68 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 CCL8P80075 99 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 FAM201AQ5SY85 155 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 DUX4L9Q6RFH8 374 aaPredicted RBP3.81□□□□□ -1.8
LINC00458-202ENST00000427299 FA2HQ7L5A8 372 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms