RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 NBEAQ8NFP9 2946 aa12.71□□□□□ -0.37
PKP4-205ENST00000426248 LTAP01374 205 aa12.71□□□□□ -0.38
PKP4-205ENST00000426248 IGHV1-8P0DP01 117 aa12.71□□□□□ -0.38
PKP4-205ENST00000426248 ZNF843Q8N446 348 aa12.71□□□□□ -0.38
PKP4-205ENST00000426248 NPIPB3Q92617 1050 aa12.71□□□□□ -0.38
PKP4-205ENST00000426248 PSG8Q9UQ74 426 aa12.71□□□□□ -0.38
PKP4-205ENST00000426248 FAM106CPP0CH98 169 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 BRWD1-AS2P59051 145 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 FAM106AQ4KMX7 169 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 GOLT1AQ6ZVE7 132 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 EPDR1Q9UM22 224 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 D6R8Y8 96 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 ARMS2P0C7Q2 107 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 CT45A10P0DMU9 189 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 CKS2P33552 79 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 TTC9CQ8N5M4 171 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
PKP4-205ENST00000426248 DEFB104AQ8WTQ1 72 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 NPIPB6E9PJ23 425 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 ZNF329Q86UD4 541 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 MBD6Q96DN6 1003 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 ZNF503Q96F45 646 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 PRR20EP86478 221 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 PRR20CP86479 221 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 PRR20DP86480 221 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 PRR20BP86481 221 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 PRR20AP86496 221 aa12.69□□□□□ -0.38
PKP4-205ENST00000426248 TANC2Q9HCD6 1990 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 PRSS29PA6NIE9 313 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 HBDP02042 147 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 LOXL1Q08397 574 aaPredicted RBP12.68□□□□□ -0.38
PKP4-205ENST00000426248 OSR1Q8TAX0 266 aaPredicted RBP12.68□□□□□ -0.38
PKP4-205ENST00000426248 FOXC2Q99958 501 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 SMKR1H3BMG3 65 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 UTF1Q5T230 341 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 FAM231DQ6ZW35 169 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 OR4C13Q8NGP0 309 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 IGHV3-23P01764 117 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 IL4P05112 153 aa12.68□□□□□ -0.38
PKP4-205ENST00000426248 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
PKP4-205ENST00000426248 PRNDQ9UKY0 176 aa12.67□□□□□ -0.38
PKP4-205ENST00000426248 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
PKP4-205ENST00000426248 C15orf61A6NNL5 157 aa12.67□□□□□ -0.38
PKP4-205ENST00000426248 DPM3Q9P2X0 92 aa12.67□□□□□ -0.38
PKP4-205ENST00000426248 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
PKP4-205ENST00000426248 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
PKP4-205ENST00000426248 LOXL3P58215 753 aa12.67□□□□□ -0.38
PKP4-205ENST00000426248 SRSF9Q13242 221 aaKnown RBP eCLIP12.67□□□□□ -0.38
PKP4-205ENST00000426248 MRPL32Q9BYC8 188 aaKnown RBP12.67□□□□□ -0.38
PKP4-205ENST00000426248 PRTN3P24158 256 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 TMEM30BQ3MIR4 351 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 SCGB1D4Q6XE38 83 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 SPATA25Q9BR10 227 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 NDFIP1Q9BT67 221 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 TCRBV4S1A1TA0A5B7 111 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 IGLL5B9A064 214 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 TMEM155Q4W5P6 130 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 TRBV7-9A0A0J9YWB2 115 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 P0C879 139 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 DIAPH2-AS1Q14236 149 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 ZC2HC1BQ5TFG8 222 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 IGFBPL1Q8WX77 278 aa12.66□□□□□ -0.38
PKP4-205ENST00000426248 LINC00322Q6ZN03 302 aaPredicted RBP12.65□□□□□ -0.38
PKP4-205ENST00000426248 PTH2Q96A98 100 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 OR1L8Q8NGR8 309 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 SLC25A2Q9BXI2 301 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 SNCGO76070 127 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 SLC25A48Q6ZT89 311 aaKnown RBP12.65□□□□□ -0.38
PKP4-205ENST00000426248 OR5AN1Q8NGI8 311 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 DSCAML1Q8TD84 2053 aa12.65□□□□□ -0.38
PKP4-205ENST00000426248 IGHV3-66A0A0C4DH42 116 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 A0A1W2PPR1 153 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 AMN1Q8IY45 258 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 C3orf56Q8N813 242 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.64□□□□□ -0.39
PKP4-205ENST00000426248 IGKV1OR2-108A0A075B7D4 117 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 ECSCRQ19T08 205 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 A0A1B0GXF2 115 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 SAA1P0DJI8 122 aaPredicted RBP12.64□□□□□ -0.39
PKP4-205ENST00000426248 TWIST1Q15672 202 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 FGF6P10767 208 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
PKP4-205ENST00000426248 J3QKU1 62 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 GAGE2BQ13066 116 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 GAGE2EQ4V326 116 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 C10orf55Q5SWW7 151 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 C1orf122Q6ZSJ8 110 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 ORMDL3Q8N138 153 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 GAGE2DQ9UEU5 116 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 TRAV8-2A0A0B4J237 113 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 TIMM23O14925 209 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 NDUFA3O95167 84 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 C5orf64Q2M2E5 130 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms