RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HBE1P02100 147 aa9.75□□□□□ -0.85
SNX3-204ENST00000426155 APOC3P02656 99 aa9.75□□□□□ -0.85
SNX3-204ENST00000426155 HIST1H1EP10412 219 aaKnown RBP9.75□□□□□ -0.85
SNX3-204ENST00000426155 EIF5AP63241 154 aaKnown RBP9.75□□□□□ -0.85
SNX3-204ENST00000426155 RPP25LQ8N5L8 163 aaKnown RBP9.75□□□□□ -0.85
SNX3-204ENST00000426155 MRPL32Q9BYC8 188 aaKnown RBP9.75□□□□□ -0.85
SNX3-204ENST00000426155 PPP1R14DQ9NXH3 145 aa9.75□□□□□ -0.85
SNX3-204ENST00000426155 FUT9Q9Y231 359 aa9.75□□□□□ -0.85
SNX3-204ENST00000426155 J3KRW8 73 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 ZNF253O75346 499 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 IFNA5P01569 189 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 AMBPP02760 352 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 RRN3P1Q2M238 152 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 SVBPQ8N300 66 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 OR10J6PQ8NGY7 276 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 SCGB1C1Q8TD33 95 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 FXYD5Q96DB9 178 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 ZNF503Q96F45 646 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 NKX6-2Q9C056 277 aaPredicted RBP9.74□□□□□ -0.85
SNX3-204ENST00000426155 TNFSF18Q9UNG2 199 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 YTHDF2Q9Y5A9 579 aaKnown RBP9.74□□□□□ -0.85
SNX3-204ENST00000426155 TIMM9Q9Y5J7 89 aa9.74□□□□□ -0.85
SNX3-204ENST00000426155 IGLL5B9A064 214 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 NPIPB6E9PJ23 425 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 OR7C2O60412 319 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 CT45A10P0DMU9 189 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 AZU1P20160 251 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 CDKN1BP46527 198 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 ERCC8Q13216 396 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 C2CD4CQ8TF44 421 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 PAXXQ9BUH6 204 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 OR51M1Q9H341 326 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 DKK2Q9UBU2 259 aa9.73□□□□□ -0.85
SNX3-204ENST00000426155 IGKV2-40A0A087WW87 121 aaPredicted RBP9.72□□□□□ -0.85
SNX3-204ENST00000426155 TRAV10A0A0B4J240 114 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 TMEM189A5PLL7 270 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 C11orf94C9JXX5 98 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 IGKV2D-40P01614 121 aaPredicted RBP9.72□□□□□ -0.85
SNX3-204ENST00000426155 SPART-AS1P0CW21 52 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 TPT1P13693 172 aaKnown RBP9.72□□□□□ -0.85
SNX3-204ENST00000426155 RAB2AP61019 212 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 PDE6HQ13956 83 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 ICAM4Q14773 271 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 GFI1BQ5VTD9 330 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 EIF5AL1Q6IS14 154 aaKnown RBP9.72□□□□□ -0.85
SNX3-204ENST00000426155 HSD17B11Q8NBQ5 300 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 AQP10Q96PS8 301 aa9.72□□□□□ -0.85
SNX3-204ENST00000426155 ZNF471Q9BX82 626 aaPredicted RBP9.72□□□□□ -0.85
SNX3-204ENST00000426155 DNAH6Q9C0G6 4158 aa9.71□□□□□ -0.85
SNX3-204ENST00000426155 DEFB131BA0A096LNP1 70 aa9.71□□□□□ -0.86
SNX3-204ENST00000426155 RNF222A6NCQ9 220 aa9.71□□□□□ -0.86
SNX3-204ENST00000426155 NBEAP1P0C6P0 100 aa9.71□□□□□ -0.86
SNX3-204ENST00000426155 HTN1P15515 57 aa9.71□□□□□ -0.86
SNX3-204ENST00000426155 UBE2L3P68036 154 aaKnown RBP9.71□□□□□ -0.86
SNX3-204ENST00000426155 S100A12P80511 92 aa9.71□□□□□ -0.86
SNX3-204ENST00000426155 RNF141Q8WVD5 230 aa9.71□□□□□ -0.86
SNX3-204ENST00000426155 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.86
SNX3-204ENST00000426155 LINC01587Q99440 93 aa9.71□□□□□ -0.86
SNX3-204ENST00000426155 APLNQ9ULZ1 77 aa9.71□□□□□ -0.86
SNX3-204ENST00000426155 IGHV4-4A0A075B6R2 117 aa9.7□□□□□ -0.86
SNX3-204ENST00000426155 PLAC8L1A1L4L8 177 aa9.7□□□□□ -0.86
SNX3-204ENST00000426155 HMGB3O15347 200 aaKnown RBP9.7□□□□□ -0.86
SNX3-204ENST00000426155 H2AFB1P0C5Y9 115 aa9.7□□□□□ -0.86
SNX3-204ENST00000426155 STOML3Q8TAV4 291 aa9.7□□□□□ -0.86
SNX3-204ENST00000426155 AAMDCQ9H7C9 122 aa9.7□□□□□ -0.86
SNX3-204ENST00000426155 SNAPINO95295 136 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 HTN3P15516 51 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 KHDC3LQ587J8 217 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 LINC00518Q8N0U6 118 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 VGLL1Q99990 258 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 NIPSNAP3BQ9BS92 247 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 AGPAT4-IT1Q9H0P7 198 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 SH3BGRL3Q9H299 93 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 BIN3Q9NQY0 253 aa9.69□□□□□ -0.86
SNX3-204ENST00000426155 TRAV12-3A0A0B4J271 114 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 TMEM218A2RU14 115 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 ATP6V0CP27449 155 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 LEPP41159 167 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 RANP62826 216 aaKnown RBP9.68□□□□□ -0.86
SNX3-204ENST00000426155 ZNF266Q14584 549 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 ACOT6Q3I5F7 207 aaPredicted RBP9.68□□□□□ -0.86
SNX3-204ENST00000426155 PRR9Q5T870 116 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 RPL7L1Q6DKI1 246 aaKnown RBP9.68□□□□□ -0.86
SNX3-204ENST00000426155 TMEM256Q8N2U0 113 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 OR10G4Q8NGN3 311 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 OR10G9Q8NGN4 311 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 OR10G7Q8NGN6 311 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 Q8TAT8 98 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 Q9H3A6 140 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
SNX3-204ENST00000426155 TAAR5O14804 337 aa9.67□□□□□ -0.86
SNX3-204ENST00000426155 TSPOP30536 169 aa9.67□□□□□ -0.86
SNX3-204ENST00000426155 TAS2R60P59551 318 aa9.67□□□□□ -0.86
SNX3-204ENST00000426155 DAD1P61803 113 aa9.67□□□□□ -0.86
SNX3-204ENST00000426155 FAM19A4Q96LR4 140 aa9.67□□□□□ -0.86
SNX3-204ENST00000426155 ODF3Q96PU9 254 aa9.67□□□□□ -0.86
SNX3-204ENST00000426155 CARHSP1Q9Y2V2 147 aaKnown RBP9.67□□□□□ -0.86
SNX3-204ENST00000426155 FRAS1Q86XX4 4008 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 TEX48A0A1B0GUV7 120 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms