RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 MAP1BP46821 2468 aaKnown RBP13.46□□□□□ -0.25
RARA-206ENST00000425707 M0R1W7 72 aa13.46□□□□□ -0.26
RARA-206ENST00000425707 LEPP41159 167 aa13.46□□□□□ -0.26
RARA-206ENST00000425707 TAL2Q16559 108 aa13.46□□□□□ -0.26
RARA-206ENST00000425707 PRSS57Q6UWY2 283 aa13.46□□□□□ -0.26
RARA-206ENST00000425707 SMAD5-AS1Q9Y6J3 95 aa13.46□□□□□ -0.26
RARA-206ENST00000425707 KLK9Q2XQG4 91 aa13.45□□□□□ -0.26
RARA-206ENST00000425707 VGLL1Q99990 258 aa13.45□□□□□ -0.26
RARA-206ENST00000425707 KLK9Q9UKQ9 250 aa13.45□□□□□ -0.26
RARA-206ENST00000425707 ONECUT1Q9UBC0 465 aa13.45□□□□□ -0.26
RARA-206ENST00000425707 DMXL2Q8TDJ6 3036 aa13.45□□□□□ -0.26
RARA-206ENST00000425707 OOSP1A8MZH6 123 aa13.45□□□□□ -0.26
RARA-206ENST00000425707 FXYD7P58549 80 aa13.45□□□□□ -0.26
RARA-206ENST00000425707 KLF17Q5JT82 389 aaPredicted RBP13.45□□□□□ -0.26
RARA-206ENST00000425707 CHAC1Q9BUX1 264 aa13.45□□□□□ -0.26
RARA-206ENST00000425707 DPM2O94777 84 aa13.44□□□□□ -0.26
RARA-206ENST00000425707 PRB3Q04118 309 aaPredicted RBP13.44□□□□□ -0.26
RARA-206ENST00000425707 ABCA1O95477 2261 aa13.44□□□□□ -0.26
RARA-206ENST00000425707 IGLV2-18A0A075B6J9 118 aa13.44□□□□□ -0.26
RARA-206ENST00000425707 PHLDA1Q8WV24 401 aaPredicted RBP13.44□□□□□ -0.26
RARA-206ENST00000425707 RAB37Q96AX2 223 aa13.44□□□□□ -0.26
RARA-206ENST00000425707 TMEM238C9JI98 176 aa13.43□□□□□ -0.26
RARA-206ENST00000425707 CTSGP08311 255 aa13.43□□□□□ -0.26
RARA-206ENST00000425707 NCOR2Q9Y618 2525 aa13.43□□□□□ -0.26
RARA-206ENST00000425707 ORM1P02763 201 aa13.43□□□□□ -0.26
RARA-206ENST00000425707 EBI3Q14213 229 aa13.43□□□□□ -0.26
RARA-206ENST00000425707 CCDC144NLQ6NUI1 221 aa13.43□□□□□ -0.26
RARA-206ENST00000425707 Q8N6K4 173 aa13.43□□□□□ -0.26
RARA-206ENST00000425707 Q8TAT8 98 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 MGAQ8IWI9 3026 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 IGKV2D-26A0A0A0MRZ7 120 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 IL17RELQ6ZVW7 336 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 PRSS1P07477 247 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 PRTN3P24158 256 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 FXYD2P54710 66 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 CEND1Q8N111 149 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 SLC50A1Q9BRV3 221 aa13.42□□□□□ -0.26
RARA-206ENST00000425707 APC2O95996 2303 aa13.41□□□□□ -0.26
RARA-206ENST00000425707 TRBV25-1A0A075B6N4 114 aa13.41□□□□□ -0.26
RARA-206ENST00000425707 C18orf15Q96N68 181 aa13.41□□□□□ -0.26
RARA-206ENST00000425707 MSRB1Q9NZV6 116 aa13.41□□□□□ -0.26
RARA-206ENST00000425707 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.41□□□□□ -0.26
RARA-206ENST00000425707 LINC01619G3V211 115 aa13.41□□□□□ -0.26
RARA-206ENST00000425707 GCSHP23434 173 aa13.41□□□□□ -0.26
RARA-206ENST00000425707 S4R3C0 116 aa13.41□□□□□ -0.26
RARA-206ENST00000425707 ACACAQ13085 2346 aa13.41□□□□□ -0.26
RARA-206ENST00000425707 RIPPLY3P57055 190 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 C1orf122Q6ZSJ8 110 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 MRPL53Q96EL3 112 aaKnown RBP13.4□□□□□ -0.26
RARA-206ENST00000425707 NAA38Q9BRA0 125 aaKnown RBP13.4□□□□□ -0.26
RARA-206ENST00000425707 BOD1L1Q8NFC6 3051 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 IGHV4-4A0A075B6R2 117 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 LYNX1G3V0Z9 82 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 LYNX1P0DP58 116 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 DTX2Q86UW9 622 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 TMEM158Q8WZ71 300 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 HIF1ANQ9NWT6 349 aa13.4□□□□□ -0.26
RARA-206ENST00000425707 E9PLD3 99 aa13.39□□□□□ -0.27
RARA-206ENST00000425707 SCGB1A1P11684 91 aa13.39□□□□□ -0.27
RARA-206ENST00000425707 NDPQ00604 133 aa13.39□□□□□ -0.27
RARA-206ENST00000425707 DYNAPQ8N1N2 210 aa13.39□□□□□ -0.27
RARA-206ENST00000425707 Q8NA96 180 aa13.39□□□□□ -0.27
RARA-206ENST00000425707 FOXC2Q99958 501 aa13.39□□□□□ -0.27
RARA-206ENST00000425707 PRB4P10163 310 aaPredicted RBP13.39□□□□□ -0.27
RARA-206ENST00000425707 IGF2RP11717 2491 aa13.38□□□□□ -0.27
RARA-206ENST00000425707 CHD8Q9HCK8 2581 aa13.38□□□□□ -0.27
RARA-206ENST00000425707 HES1Q14469 280 aa13.38□□□□□ -0.27
RARA-206ENST00000425707 F8W1H4 67 aa13.38□□□□□ -0.27
RARA-206ENST00000425707 ZC2HC1BQ5TFG8 222 aa13.38□□□□□ -0.27
RARA-206ENST00000425707 MINOS1Q5TGZ0 78 aa13.38□□□□□ -0.27
RARA-206ENST00000425707 WFDC3Q8IUB2 231 aa13.38□□□□□ -0.27
RARA-206ENST00000425707 MINOS1-NBL1R4GNA1 71 aa13.38□□□□□ -0.27
RARA-206ENST00000425707 TMEM8BA6NDV4 472 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 PLNP26678 52 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 TCTAP57738 103 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 LAGE3Q14657 143 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 MYOZ3Q8TDC0 251 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 A0A087WX48 190 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 TRAV12-1A0A0B4J245 112 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 BUB3O43684 328 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 GAS8-AS1O95177 125 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 NRACQ8N912 160 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 ZFAND3Q9H8U3 227 aa13.37□□□□□ -0.27
RARA-206ENST00000425707 ROS1P08922 2347 aa13.36□□□□□ -0.27
RARA-206ENST00000425707 ZNF207O43670 478 aaKnown RBP13.36□□□□□ -0.27
RARA-206ENST00000425707 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
RARA-206ENST00000425707 FOXC1Q12948 553 aa13.36□□□□□ -0.27
RARA-206ENST00000425707 ZNF502Q8TBZ5 544 aa13.36□□□□□ -0.27
RARA-206ENST00000425707 TIMD4Q96H15 378 aa13.36□□□□□ -0.27
RARA-206ENST00000425707 VKORC1Q9BQB6 163 aa13.36□□□□□ -0.27
RARA-206ENST00000425707 PKDREJQ9NTG1 2253 aa13.36□□□□□ -0.27
RARA-206ENST00000425707 FAM110DQ8TAY7 271 aaPredicted RBP13.36□□□□□ -0.27
RARA-206ENST00000425707 IGKV3D-20A0A0C4DH25 116 aa13.35□□□□□ -0.27
RARA-206ENST00000425707 FBXL19-AS1Q494R0 122 aa13.35□□□□□ -0.27
RARA-206ENST00000425707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.35□□□□□ -0.27
RARA-206ENST00000425707 FOXI2Q6ZQN5 318 aa13.35□□□□□ -0.27
RARA-206ENST00000425707 GTSCR1Q86UQ5 136 aa13.35□□□□□ -0.27
RARA-206ENST00000425707 SH3BGRL2Q9UJC5 107 aa13.35□□□□□ -0.27
RARA-206ENST00000425707 MRAP2Q96G30 205 aa13.34□□□□□ -0.27
RARA-206ENST00000425707 CHTOPQ9Y3Y2 248 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms