RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 PPP1R27Q86WC6 154 aa10.58□□□□□ -0.72
LRCH3-203ENST00000425562 TRAV26-2A0A0B4J265 109 aa10.58□□□□□ -0.72
LRCH3-203ENST00000425562 IGHV3-66A0A0C4DH42 116 aa10.57□□□□□ -0.72
LRCH3-203ENST00000425562 OR9G4Q8NGQ1 327 aa10.57□□□□□ -0.72
LRCH3-203ENST00000425562 VGLL1Q99990 258 aa10.57□□□□□ -0.72
LRCH3-203ENST00000425562 SCNM1Q9BWG6 230 aa10.57□□□□□ -0.72
LRCH3-203ENST00000425562 TRAV40A0A0B4J280 105 aa10.57□□□□□ -0.72
LRCH3-203ENST00000425562 OR4X2Q8NGF9 303 aa10.57□□□□□ -0.72
LRCH3-203ENST00000425562 TRBV25-1A0A075B6N4 114 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 WI2-2373I1.2A0A1W2PRP0 233 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 PRRG2O14669 202 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 LY6HO94772 140 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 LOXP28300 417 aaPredicted RBP10.56□□□□□ -0.72
LRCH3-203ENST00000425562 TEX22C9J3V5 150 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 ERCC8Q13216 396 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 GFRALQ6UXV0 394 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 MAPKAPK5-AS1Q8N8E1 139 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 RNF125Q96EQ8 232 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 LINC00574Q9H8X3 128 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 HRNRQ86YZ3 2850 aaPredicted RBP10.56□□□□□ -0.72
LRCH3-203ENST00000425562 NDUFA3O95167 84 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 IGHV1-8P0DP01 117 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 IGFL3Q6UXB1 125 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 OR5A1Q8NGJ0 315 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
LRCH3-203ENST00000425562 NCOR1P1Q9H4R4 102 aa10.56□□□□□ -0.72
LRCH3-203ENST00000425562 TMEM8BA6NDV4 472 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 J3KRW8 73 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 TMEM158Q8WZ71 300 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 SIGMAR1Q99720 223 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 CUBNO60494 3623 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 IGHV3-49A0A0A0MS15 119 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 ZNF562Q6V9R5 426 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 Q6ZQT7 251 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
LRCH3-203ENST00000425562 GAGE12HA6NDE8 117 aa10.54□□□□□ -0.72
LRCH3-203ENST00000425562 I3L2K1 104 aa10.54□□□□□ -0.72
LRCH3-203ENST00000425562 TGFAP01135 160 aa10.54□□□□□ -0.72
LRCH3-203ENST00000425562 HES1Q14469 280 aa10.54□□□□□ -0.72
LRCH3-203ENST00000425562 ZNF491Q8N8L2 437 aa10.54□□□□□ -0.72
LRCH3-203ENST00000425562 NUP37Q8NFH4 326 aa10.54□□□□□ -0.72
LRCH3-203ENST00000425562 SHANK2-AS3Q9BTD1 123 aa10.54□□□□□ -0.72
LRCH3-203ENST00000425562 RNASE6Q93091 150 aaKnown RBP10.54□□□□□ -0.72
LRCH3-203ENST00000425562 E7EQL1 145 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 EFNA4P52798 201 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 ODF1Q14990 250 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 C16orf54Q6UWD8 224 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 HHLA3Q9XRX5 114 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 UFC1Q9Y3C8 167 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 IGHV1-3A0A0C4DH29 117 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 INS-IGF2F8WCM5 200 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 K7EIM0 57 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 MC5RP33032 325 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 RNF182Q8N6D2 247 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 RPEQ96AT9 228 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 ZNF479Q96JC4 524 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 MRPL35Q9NZE8 188 aaKnown RBP10.53□□□□□ -0.72
LRCH3-203ENST00000425562 LINC01560Q8TB33 94 aa10.53□□□□□ -0.72
LRCH3-203ENST00000425562 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
LRCH3-203ENST00000425562 IGKCP01834 107 aa10.52□□□□□ -0.73
LRCH3-203ENST00000425562 HIST1H4GQ99525 98 aa10.52□□□□□ -0.73
LRCH3-203ENST00000425562 MAP1LC3AQ9H492 121 aa10.52□□□□□ -0.73
LRCH3-203ENST00000425562 TNFRSF6BO95407 300 aa10.51□□□□□ -0.73
LRCH3-203ENST00000425562 TRGV3P03979 118 aa10.51□□□□□ -0.73
LRCH3-203ENST00000425562 GRNP28799 593 aaKnown RBP10.51□□□□□ -0.73
LRCH3-203ENST00000425562 CEACAM3P40198 252 aa10.51□□□□□ -0.73
LRCH3-203ENST00000425562 CCDC144NLQ6NUI1 221 aa10.51□□□□□ -0.73
LRCH3-203ENST00000425562 H3BRN7 92 aa10.51□□□□□ -0.73
LRCH3-203ENST00000425562 HOXB4P17483 251 aaPredicted RBP10.51□□□□□ -0.73
LRCH3-203ENST00000425562 Q8NA96 180 aa10.51□□□□□ -0.73
LRCH3-203ENST00000425562 C20orf78Q9BR46 151 aa10.51□□□□□ -0.73
LRCH3-203ENST00000425562 CHTOPQ9Y3Y2 248 aaKnown RBP10.51□□□□□ -0.73
LRCH3-203ENST00000425562 VPS13CQ709C8 3753 aa10.51□□□□□ -0.73
LRCH3-203ENST00000425562 PRAC2D3DTV9 90 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 TIMM23O14925 209 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 PAX8Q06710 450 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 C3orf36Q3SXR2 165 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 ZNF493Q6ZR52 646 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 PRR25Q96S07 402 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 SPANXB1Q9NS25 103 aaPredicted RBP10.5□□□□□ -0.73
LRCH3-203ENST00000425562 TMEM14CQ9P0S9 112 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 CHD8Q9HCK8 2581 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 SPTBN4Q9H254 2564 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 NCOR2Q9Y618 2525 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 IGLL5B9A064 214 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 RAB9AP51151 201 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 TMEM155Q4W5P6 130 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 ONECUT1Q9UBC0 465 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 CYSLTR1Q9Y271 337 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 A0A1B0GWB2 263 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 SHISA9B4DS77 424 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 DLX6P56179 175 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 CEND1Q8N111 149 aa10.5□□□□□ -0.73
LRCH3-203ENST00000425562 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
LRCH3-203ENST00000425562 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
LRCH3-203ENST00000425562 FAM90A27PA6NNH2 459 aa10.49□□□□□ -0.73
LRCH3-203ENST00000425562 SMIM17P0DL12 118 aa10.49□□□□□ -0.73
LRCH3-203ENST00000425562 KLRD1Q13241 179 aa10.49□□□□□ -0.73
LRCH3-203ENST00000425562 CD300EQ496F6 205 aaPredicted RBP10.49□□□□□ -0.73
LRCH3-203ENST00000425562 PTH2Q96A98 100 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms