RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 HIST1H2BMQ99879 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 IGHV3-35A0A0C4DH35 117 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 DIRC3C9JPN6 131 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 HOXA5P20719 270 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 FABP9Q0Z7S8 132 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 FRZBQ92765 325 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 C17orf77Q96MU5 243 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 U3KQE9 123 aa11.87□□□□□ -0.51
SHOX2-202ENST00000425436 ZNF785A8K8V0 405 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 S100A8P05109 93 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 NDUFA6P56556 154 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 SYNJ2BPP57105 145 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 PSG3Q16557 428 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 RASL11AQ6T310 242 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 Q86TA4 180 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 NOTCH3Q9UM47 2321 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 MT-ND6P03923 174 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 IGLL1P15814 213 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 KLF5Q13887 457 aaPredicted RBP11.86□□□□□ -0.51
SHOX2-202ENST00000425436 OR4B1Q8NGF8 309 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 GNB1LQ9BYB4 327 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 PSG8Q9UQ74 426 aa11.86□□□□□ -0.51
SHOX2-202ENST00000425436 A0A1W2PS18 150 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 IZUMO1RA6ND01 250 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 A8MWL6 223 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 OVOL1O14753 267 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 IGLV2-11P01706 119 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 P01737 135 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 SAPCD1Q5SSQ6 148 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 PRNTQ86SH4 94 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 NHLRC2Q8NBF2 726 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 TSKUQ8WUA8 353 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 ZNF331Q9NQX6 463 aaPredicted RBP11.85□□□□□ -0.51
SHOX2-202ENST00000425436 NAT8BQ9UHF3 227 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 SMAD5-AS1Q9Y6J3 95 aa11.85□□□□□ -0.51
SHOX2-202ENST00000425436 MGAM2Q2M2H8 2515 aa11.84□□□□□ -0.51
SHOX2-202ENST00000425436 AKR1D1P51857 326 aa11.84□□□□□ -0.51
SHOX2-202ENST00000425436 OXLD1Q5BKU9 147 aa11.84□□□□□ -0.51
SHOX2-202ENST00000425436 MRPL53Q96EL3 112 aaKnown RBP11.84□□□□□ -0.51
SHOX2-202ENST00000425436 GFRA4Q9GZZ7 299 aa11.84□□□□□ -0.51
SHOX2-202ENST00000425436 C19orf71A6NCJ1 209 aa11.83□□□□□ -0.52
SHOX2-202ENST00000425436 PRR27Q6MZM9 219 aa11.83□□□□□ -0.52
SHOX2-202ENST00000425436 RPP21Q9H633 154 aaKnown RBP11.83□□□□□ -0.52
SHOX2-202ENST00000425436 IGHV3OR16-8A0A075B7F1 116 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 RBAKDNA6NC62 111 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 SMUG1Q53HV7 270 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 COA6Q5JTJ3 125 aaKnown RBP11.82□□□□□ -0.52
SHOX2-202ENST00000425436 C16orf54Q6UWD8 224 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 UNQ9165/PRO28630Q6UXU0 137 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 COX8CQ7Z4L0 72 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 GPHB5Q86YW7 130 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 GBGT1Q8N5D6 347 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 SGK494Q96LW2 274 aa11.82□□□□□ -0.52
SHOX2-202ENST00000425436 NPIPB6E9PJ23 425 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 G3V4G9 280 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 K7EMT4 169 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 CT45A10P0DMU9 189 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 EDN2P20800 178 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 ATP5L2Q7Z4Y8 100 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 NBEAL1Q6ZS30 2694 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 M0R3E3 92 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 BMI1P35226 326 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 LCN12Q6JVE5 192 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 OR9G4Q8NGQ1 327 aa11.81□□□□□ -0.52
SHOX2-202ENST00000425436 TRAV8-1A0A0A6YYK1 113 aa11.8□□□□□ -0.52
SHOX2-202ENST00000425436 CHEK1O14757 476 aa11.8□□□□□ -0.52
SHOX2-202ENST00000425436 HLA-DQA1P01909 254 aa11.8□□□□□ -0.52
SHOX2-202ENST00000425436 NDFIP1Q9BT67 221 aa11.8□□□□□ -0.52
SHOX2-202ENST00000425436 XKRY2A2RUG3 117 aa11.79□□□□□ -0.52
SHOX2-202ENST00000425436 SAP30O75446 220 aa11.79□□□□□ -0.52
SHOX2-202ENST00000425436 S100A2P29034 98 aa11.79□□□□□ -0.52
SHOX2-202ENST00000425436 TM4SF20Q53R12 229 aa11.79□□□□□ -0.52
SHOX2-202ENST00000425436 SAMD13Q5VXD3 122 aa11.79□□□□□ -0.52
SHOX2-202ENST00000425436 LINC00518Q8N0U6 118 aa11.79□□□□□ -0.52
SHOX2-202ENST00000425436 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
SHOX2-202ENST00000425436 MRPL18Q9H0U6 180 aaKnown RBP11.79□□□□□ -0.52
SHOX2-202ENST00000425436 SELENOKQ9Y6D0 94 aa11.79□□□□□ -0.52
SHOX2-202ENST00000425436 SNURFLB1AK76 121 aa11.78□□□□□ -0.52
SHOX2-202ENST00000425436 LGALS9O00182 355 aa11.78□□□□□ -0.52
SHOX2-202ENST00000425436 ZNF207O43670 478 aaKnown RBP11.78□□□□□ -0.52
SHOX2-202ENST00000425436 CSN3P07498 182 aa11.78□□□□□ -0.52
SHOX2-202ENST00000425436 FOXA3P55318 350 aaPredicted RBP11.78□□□□□ -0.52
SHOX2-202ENST00000425436 TCL1AP56279 114 aa11.78□□□□□ -0.52
SHOX2-202ENST00000425436 NUP35Q8NFH5 326 aa11.78□□□□□ -0.52
SHOX2-202ENST00000425436 NEU1Q99519 415 aa11.78□□□□□ -0.52
SHOX2-202ENST00000425436 MCRIP2Q9BUT9 160 aaKnown RBP11.78□□□□□ -0.52
SHOX2-202ENST00000425436 DAZ1Q9NQZ3 744 aaKnown RBP11.78□□□□□ -0.52
SHOX2-202ENST00000425436 UFC1Q9Y3C8 167 aa11.78□□□□□ -0.52
SHOX2-202ENST00000425436 HIGD1CA8MV81 97 aa11.77□□□□□ -0.52
SHOX2-202ENST00000425436 APOHP02749 345 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms