RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 MCM3APO60318 1980 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 C3P01024 1663 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 PIKFYVEQ9Y2I7 2098 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 IGKV3D-15A0A087WSY6 115 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 IGHV1OR21-1A0A087WYE8 117 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 K7ERJ3 54 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 COX7A2LO14548 114 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 TRBV12-3P01733 135 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 HBDP02042 147 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 SCGB1C2P0DMR2 95 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 CSRP3P50461 194 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 SSBP1Q04837 148 aaKnown RBP2.11□□□□□ -2.07
PMS1-209ENST00000424059 INSL4Q14641 139 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 ZFP2Q6ZN57 461 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 Q8N8P6 123 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 H1FXQ92522 213 aaKnown RBP2.11□□□□□ -2.07
PMS1-209ENST00000424059 TIMM17AQ99595 171 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 MGST2Q99735 147 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 NXT2Q9NPJ8 142 aaKnown RBP2.11□□□□□ -2.07
PMS1-209ENST00000424059 SLC25A15Q9Y619 301 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 HCFC1P51610 2035 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 C4AP0C0L4 1744 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 C4BP0C0L5 1744 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 C2orf16Q68DN1 1984 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 EXPH5Q8NEV8 1989 aa2.11□□□□□ -2.07
PMS1-209ENST00000424059 LOC389332A0A1B0GUA5 103 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 UBE2L5PA0A1B0GUS4 154 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 A0A1W2PQD3 144 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 TIMM17BO60830 172 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 IGKV1-5P01602 117 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 PRH1P02810 166 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 NOVP48745 357 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 FXYD2P54710 66 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 SEC61BP60468 96 aaKnown RBP2.1□□□□□ -2.07
PMS1-209ENST00000424059 HERVK_113P61574 105 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 UBE2L3P68036 154 aaKnown RBP2.1□□□□□ -2.07
PMS1-209ENST00000424059 ZNF791Q3KP31 576 aaPredicted RBP2.1□□□□□ -2.07
PMS1-209ENST00000424059 C6orf99Q4VX62 202 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 DEFB121Q5J5C9 76 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 FAM219BQ5XKK7 198 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 Q6P435 159 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 IGFL3Q6UXB1 125 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 GPHB5Q86YW7 130 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 CD177Q8N6Q3 437 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 ZNF645Q8N7E2 425 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 ZNF491Q8N8L2 437 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 RNASE6Q93091 150 aaKnown RBP2.1□□□□□ -2.07
PMS1-209ENST00000424059 TRGV9Q99603 122 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 Q9H3A6 140 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 ZNF286AQ9HBT8 521 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 ZNF492Q9P255 531 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 SLIT1O75093 1534 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 SLIT2O94813 1529 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 MED1Q15648 1581 aaPredicted RBP2.1□□□□□ -2.07
PMS1-209ENST00000424059 LAMA4Q16363 1823 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 SLX4Q8IY92 1834 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 KIAA1671Q9BY89 1806 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 GBF1Q92538 1859 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 TRAV1-2A0A0B4J238 106 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 IGKV3D-20A0A0C4DH25 116 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 IBA57-AS1B1ANH7 110 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 BUB1B-PAK6H3BSN5 160 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 FCGR2CP31995 323 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 PSMB2P49721 201 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 BRWD1-AS2P59051 145 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 KIAA0087Q14695 138 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 TMEM155Q4W5P6 130 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 ATP1A1-AS1Q5TC04 95 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 NOTCH2NLQ7Z3S9 236 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 MARCH3Q86UD3 253 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 ZNF843Q8N446 348 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 TMEM252Q8N6L7 170 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 CHCHD10Q8WYQ3 142 aaPredicted RBP2.1□□□□□ -2.07
PMS1-209ENST00000424059 FAM3DQ96BQ1 224 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 VSIG2Q96IQ7 327 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 OPRPNQ99935 248 aaPredicted RBP2.1□□□□□ -2.07
PMS1-209ENST00000424059 LINC00474Q9P2X8 69 aa2.1□□□□□ -2.07
PMS1-209ENST00000424059 COL1A1P02452 1464 aaPredicted RBP2.1□□□□□ -2.07
PMS1-209ENST00000424059 THSD7AQ9UPZ6 1657 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 PLXNA1Q9UIW2 1896 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 HEATR5AQ86XA9 2040 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 PHF3Q92576 2039 aaKnown RBP2.09□□□□□ -2.07
PMS1-209ENST00000424059 DOCK8Q8NF50 2099 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 MED12LQ86YW9 2145 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 IGHV6-1A0A0B4J1U7 121 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 IGHV1-24A0A0C4DH33 117 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 IGKV1-9A0A0C4DH69 117 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 A0A0G2JRQ6 117 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 C15orf62A8K5M9 175 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 C12orf77C9JDV5 145 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 PSPHP1O15172 72 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 NXPH4O95158 308 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 CCKP06307 115 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 RPS18P62269 152 aaKnown RBP2.09□□□□□ -2.07
PMS1-209ENST00000424059 ZNF876PQ49A33 203 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 C14orf177Q52M58 125 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 PSMG4Q5JS54 123 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 CLLU1OSQ5K130 101 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 LYPD5Q6UWN5 251 aa2.09□□□□□ -2.07
PMS1-209ENST00000424059 SDIM1Q6ZPB5 146 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms