RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 HLA-DRB4X5D2U9 266 aa7.08□□□□□ -1.28
HERC3-204ENST00000422770 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
HERC3-204ENST00000422770 A0A1W2PRE2 83 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 CXorf65A6NEN9 183 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 M0R3E3 92 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 ZNF253O75346 499 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 NDUFB4O95168 129 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 ZNF705DP0CH99 300 aaPredicted RBP7.07□□□□□ -1.28
HERC3-204ENST00000422770 ZNF705BP0CI00 300 aaPredicted RBP7.07□□□□□ -1.28
HERC3-204ENST00000422770 TAGLN2P37802 199 aaKnown RBP7.07□□□□□ -1.28
HERC3-204ENST00000422770 AKR1C3P42330 323 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 PSG9Q00887 426 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 HIST1H1AQ02539 215 aaPredicted RBP7.07□□□□□ -1.28
HERC3-204ENST00000422770 CASC10Q5T4H9 136 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 CMTM2Q8TAZ6 248 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 SUN5Q8TC36 379 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 ZNF331Q9NQX6 463 aaPredicted RBP7.07□□□□□ -1.28
HERC3-204ENST00000422770 TENM3Q9P273 2699 aa7.07□□□□□ -1.28
HERC3-204ENST00000422770 TRAV8-2A0A0B4J237 113 aa7.06□□□□□ -1.28
HERC3-204ENST00000422770 PEX7O00628 323 aa7.06□□□□□ -1.28
HERC3-204ENST00000422770 SRSF3P84103 164 aaKnown RBP7.06□□□□□ -1.28
HERC3-204ENST00000422770 C5orf17Q8NAS9 161 aa7.06□□□□□ -1.28
HERC3-204ENST00000422770 SLC35B3Q9H1N7 401 aa7.06□□□□□ -1.28
HERC3-204ENST00000422770 MED9Q9NWA0 146 aa7.06□□□□□ -1.28
HERC3-204ENST00000422770 IGKV2-40A0A087WW87 121 aaPredicted RBP7.05□□□□□ -1.28
HERC3-204ENST00000422770 A0A0J9YX75 114 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 RAB19A4D1S5 217 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 PGPA6NDG6 321 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 F6UZH7 168 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 DUSP14O95147 198 aaKnown RBP7.05□□□□□ -1.28
HERC3-204ENST00000422770 IGKV2D-40P01614 121 aaPredicted RBP7.05□□□□□ -1.28
HERC3-204ENST00000422770 CSN1S1P47710 185 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 SUMO1P63165 101 aaKnown RBP7.05□□□□□ -1.28
HERC3-204ENST00000422770 PEA15Q15121 130 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 PSG3Q16557 428 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 ZNF674Q2M3X9 581 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 GOLT1AQ6ZVE7 132 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 CYB561D1Q8N8Q1 229 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 RPUSD4Q96CM3 377 aaKnown RBP7.05□□□□□ -1.28
HERC3-204ENST00000422770 TMEM208Q9BTX3 173 aa7.05□□□□□ -1.28
HERC3-204ENST00000422770 HUWE1Q7Z6Z7 4374 aaKnown RBP7.05□□□□□ -1.28
HERC3-204ENST00000422770 RYR3Q15413 4870 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 IGHV4-28A0A0C4DH34 117 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 M0R2Z0 102 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 PDE6DO43924 150 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 GIG44P09565 113 aaPredicted RBP7.04□□□□□ -1.28
HERC3-204ENST00000422770 SFTA3P0C7M3 94 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 CNN1P51911 297 aaKnown RBP7.04□□□□□ -1.28
HERC3-204ENST00000422770 NDUFA5Q16718 116 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 SLC7A5P1Q8MH63 180 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 LYPD1Q8N2G4 141 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 C11orf52Q96A22 123 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 MRPL53Q96EL3 112 aaKnown RBP7.04□□□□□ -1.28
HERC3-204ENST00000422770 ATG101Q9BSB4 218 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 PRELID1Q9Y255 219 aa7.04□□□□□ -1.28
HERC3-204ENST00000422770 ZNF705FA8MVS1 300 aaPredicted RBP7.03□□□□□ -1.28
HERC3-204ENST00000422770 C9JQL5 133 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 PRAC2D3DTV9 90 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 TCRAP04437 139 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 SRP19P09132 144 aaKnown RBP7.03□□□□□ -1.28
HERC3-204ENST00000422770 EMP1P54849 157 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 UBE2G1P62253 170 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 UQCC3Q6UW78 93 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 Q86TA4 180 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 OR8A1Q8NGG7 326 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 OR10J6PQ8NGY7 276 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 Q8TAT8 98 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 C11orf45Q8TAV5 145 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 TXNDC17Q9BRA2 123 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 TCEAL7Q9BRU2 100 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 DERL1Q9BUN8 251 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 NKX6-2Q9C056 277 aaPredicted RBP7.03□□□□□ -1.28
HERC3-204ENST00000422770 EPDR1Q9UM22 224 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 GOLT1BQ9Y3E0 138 aa7.03□□□□□ -1.28
HERC3-204ENST00000422770 TRAV8-1A0A0A6YYK1 113 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 TRAV34A0A0B4J273 112 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 DIRC3C9JPN6 131 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 TMEM250H0YL14 139 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 J3KRW8 73 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 K7EQM0 130 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 INSP01308 110 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 MIFP14174 115 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 NANOS2P60321 138 aaKnown RBP7.02□□□□□ -1.29
HERC3-204ENST00000422770 CCDC28AQ8IWP9 274 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 C2CD4CQ8TF44 421 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 HIST1H2BAQ96A08 127 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 SGK494Q96LW2 274 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 SMIM7Q9BQ49 75 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 PARLQ9H300 379 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 C11orf68Q9H3H3 251 aaKnown RBP7.02□□□□□ -1.29
HERC3-204ENST00000422770 X6R8D5 127 aa7.02□□□□□ -1.29
HERC3-204ENST00000422770 TRAV12-2A0A075B6T6 113 aa7.01□□□□□ -1.29
HERC3-204ENST00000422770 NUPR2A6NF83 97 aa7.01□□□□□ -1.29
HERC3-204ENST00000422770 ERCC8Q13216 396 aa7.01□□□□□ -1.29
HERC3-204ENST00000422770 CENPWQ5EE01 88 aa7.01□□□□□ -1.29
HERC3-204ENST00000422770 Q8NAQ8 132 aa7.01□□□□□ -1.29
HERC3-204ENST00000422770 CSNK1G2-AS1Q8NCQ2 148 aa7.01□□□□□ -1.29
HERC3-204ENST00000422770 STAB2Q8WWQ8 2551 aa7.01□□□□□ -1.29
HERC3-204ENST00000422770 SERTM2A0A1B0GWG4 89 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms